Tremella mesenterica: TREMEDRAFT_65984
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Entry
TREMEDRAFT_65984 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_65984
Enzymes [BR:
tms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TREMEDRAFT_65984
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Meiosis-specific proteins
Others
TREMEDRAFT_65984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Sec63
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-GeneID:
18497395
NCBI-ProteinID:
XP_007008147
JGI:
Treme1_65984
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MTQPIIPLDEVLRQLNAEVAKPRYNYDDMNDVEEHYTQVPSSDTFTPAAFDTPTPHRFHS
ALIPSPNPFQTSSSYVPLVGVPPARSYTSELVSTDTRVSSSTQRPQRSAQQQLTNMPELS
SQWPQVFPNDLAHPMQWREDDGFGADPVTEDNDQYDGDEMWKDEDALAAVDAASKPTQRE
LSSSPNAADDDEPVATIEVLNRRKAQDKDLKERRREYVTRTGTEKPVTDVPAPHCKLFEF
ATFNTMQTKVFDSVYNGDDNLVIAAPTSSGKTTVFDLAFLRMMSQETFGMTPMAVYLAPT
KALCSERMSDWSRRFQSVQLGWLCNEVTGDTGSYNEITTALRTANLIVTTPEKWDSLTRR
RSQSHHLLRRLALVMIDEVHFLHETRGATLEVLVSRIKTRADNVRFIALSATVPNVDDVA
RWIGAATNTTITTPYLTDRDGDDRDEAPDSATGVEKLSMAKVFKFGEETRPVPLTRHFYG
YEGGNEWALSPQLDKSLFPILLKHCDAKPALVFCPTRRSCLTTAQYVHKIYTEARVKYQP
LPWRPPGSKLVLKDTQVAALTDCGIAVHHAGLDYTDRRDIENAFKEQKLHLIVCTSTLAV
GVNLPAHTVVIKGTQTWQGGATGFKEYSDIEIQQMMGRAGLPREAQLKHRPGELSVRGLS
CSWHRAEFYRHQNLTEHINSEIGLGTITDLKTAQDWLKSSFLFIRIQQNPRHYAIPGLKD
KDSRTSWEEWLDHYVESALKALEEYDFVTHEDGDDDADYHRPGLSLTAIGRILSENFIAF
ETMVLIIGMKPRATLRELLEILSSAKEYEDLRIRPGEGQALNKLRTNVELRFTLDEPVKS
YADKVFLYFQVCFSNIDLENESGSGNASPHKNLMAIFQHATRITRAIVSVAKEKHYGGAC
RSALQLLHAVAGKAWENEASMFRQIESIGPKSIKVLRSKGINNFDALIAVNVSELAHFLN
RDFQFANAVHVDAECMPRYTAEISTAEVSTEGKYPIVTFRVKILQTSKTPSNNAARGNGR
RRYRPPPRHNLSILFLRSDDMWIDLRKALTSKLNDQHRIFTIQATLERPDHKIIAYIGVD
EVAGCATRVEYDPKLDADLFPEIETEEESEDEDSDNNHQSIGGSGERKATQAVSQMPCHH
RCRNRKVCAHACCKQGVSQLQTDTKRGARRGPPPDTERSPHLSTQEMHAAPLTNKSASPL
VPPTDTHDSTVYTNTTASGLSKTKTKQKQSQGNATIATQQNGTKRRKASTAGQEPTEAPQ
GSSKKPQRHVVSADAAHRFILNPTSSPFSETEEEMISEVELADLSTKKTSRQNGCVQPGP
VKRRRLVTVNSDTRGRVTPQSIPHPQVTKERQDLSTSAQAYGAINAQMTDSATLQKTQLT
SASPPISPSLSPILNMSLFEPLPPPIPLFPRVSSAAPPSVPQEPIRWWEADDEDDLDHLG
SFAVTSEKRNDKGSYPSVTSQPPSHPGERYDRHASGYHLNYRNTPLSTSMGAAIDVKGTC
ENPVGSFGDNQGQGHVYPVFEDCSPSPCIAPRSDTWSKDAPGGMGWGEADELASEQVQVN
GKGGEERDEVEEAFERFMSW
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgacacagccaatcatccccttggatgaggtattgaggcagctgaacgcagaggtcgcc
aaacccagatacaactatgatgatatgaatgacgtggaagaacactatacccaggtaccc
tcatctgatactttcactcctgcagcatttgacacccccaccccgcatcgattccattct
gctctcataccctcacccaatcccttccagacttcatcatcctatgttccactagttggt
gttcctcctgctcgctcctatacatcggaactagtctcaacggacacgcgagtctccagc
tcgacacaacggccgcaaaggtcagctcagcagcagctcaccaatatgcctgagctttca
tcacagtggcctcaggttttcccgaacgatcttgctcacccgatgcaatggcgagaagac
gatggttttggagcggacccggtcactgaagataacgatcagtatgatggggatgagatg
tggaaggacgaagatgctttggctgctgtagatgctgctagcaagcccactcaacgagaa
ctttccagcagtcccaatgcagctgacgacgatgagcctgttgcaactatcgaagttctg
aatcgtcgcaaagcccaagacaaagacctcaaagagagacgacgtgaatatgtgactcga
accggcacagagaagcccgtcactgatgttcccgcaccgcattgcaagctgttcgagttt
gccactttcaacacaatgcagacaaaggtcttcgattctgtgtataatggtgacgataac
ctagtcattgctgcgcctaccagttccgggaagaccacagtgttcgatctcgccttcctc
cgcatgatgagtcaagaaacatttgggatgacacccatggcagtatatctggcccctacg
aaagcactttgctctgaaaggatgagtgattggagtaggcggtttcagtctgtccaattg
gggtggctctgtaatgaggtcactggagacaccgggtcatacaacgagataaccaccgct
ttgaggacggcaaaccttatagttacaactcccgaaaagtgggactcactaacccgacgc
cgctcccagagtcatcaccttctccgtcgtctggccttggtgatgatagacgaggtgcac
ttcttgcacgagacccggggagcgacactagaagtacttgtctcacgaatcaaaaccaga
gcagacaacgttcgatttatcgctctaagtgccacagtgcccaacgttgatgatgtggct
aggtggattggagctgcaacgaacactactatcaccacaccatacctcactgatcgtgat
ggtgatgatagagatgaggcccctgactctgccaccggagttgagaaactctctatggcc
aaagtattcaaattcggagaggagacccgtccagtgcctctgacacgccatttttatggc
tacgagggaggtaacgaatgggctctgagccctcaacttgacaaatctcttttccccata
ctactcaagcactgtgatgccaaacccgctttggtcttctgccccactcgtcgatcgtgt
ttgacaaccgctcaatatgtccataagatctacacagaggcacgcgtcaaatatcagcct
cttccctggagacctcctggatctaagctggttttgaaagacacacaagtcgccgcactc
actgattgtggtattgcagtccaccacgcggggcttgattataccgacaggcgggacatc
gagaatgctttcaaggagcaaaaactgcatctcatcgtttgcacctcgactttggccgtt
ggagtcaatctacctgctcacaccgtggttatcaaaggtactcagacatggcagggagga
gcgacgggttttaaggagtacagtgatatcgagatccagcaaatgatgggccgggccggt
ctaccgagagaagctcaactcaaacaccgtcctggagagttgtctgtgagaggactatca
tgctcatggcatcgtgctgaattctacagacaccaaaacttgacagagcatataaacagt
gaaataggcctcggtaccatcaccgacctgaagactgcacaagactggttgaagagttcc
tttctgttcatacgtattcaacagaatccaaggcattatgcgataccgggtttgaaagat
aaggacagtcgaacatcctgggaagaatggctagatcattatgttgaaagcgctttgaag
gctctggaggaatatgattttgtgacccacgaagatggcgacgatgatgccgactaccat
cgcccggggctgtctctcactgcaatcggcaggatcctgagcgagaatttcatagcattc
gaaaccatggtcctcatcattggcatgaagcctcgtgcaactctgagggaattattagag
attctgtccagcgccaaagagtatgaggatcttcgcattcggccaggagaaggtcaggct
cttaacaagctccgaacaaatgtcgagcttcgtttcacgcttgacgagccggtgaagtca
tatgcggacaaagtgttcctatactttcaagtctgcttctccaatatcgacttagaaaac
gagtccggtagtgggaacgcatcgcctcacaagaatctcatggccatcttccaacatgca
acccgtatcacaagagcgatcgtgtctgtcgccaaagagaagcactatggtggagcctgt
cgttcagctctgcagttattacacgctgttgctgggaaagcatgggagaatgaagcttcc
atgttccgacagattgagagcattggtccaaaatcaatcaaagtgctgaggagtaaaggt
atcaataattttgatgctctcattgcggtcaacgtatccgaattggcccacttcctcaat
agagattttcaatttgccaacgcggtgcatgtcgatgccgagtgcatgcctcgctatacg
gccgagatttcaaccgccgaggtcagtaccgaagggaagtacccaattgtcacgtttcgg
gtcaagatccttcaaacttcgaaaactcccagcaacaatgccgctcgaggtaatgggaga
cgacgttaccggcccccaccgagacacaacctttccatactgtttctacgttcggatgac
atgtggatagacctccgaaaggctctaacgtccaagcttaacgatcaacataggattttc
actatacaagctacgcttgaacgtccggatcataaaatcatcgcctatatcggagtggac
gaagtggcaggttgtgccacccgagtggaatacgacccgaagcttgacgcggatcttttc
ccagaaatcgagacggaagaggagagtgaagatgaggactctgacaataatcatcaaagc
atcggaggcagcggtgaacgaaaggcgacacaggctgtgagccagatgccgtgtcaccat
cgttgtcggaatcgcaaggtctgtgcacatgcatgttgcaagcaaggcgtgtctcagctg
caaacggatacaaaacgaggagcccgacgaggtccaccacccgacaccgagcgatctcca
cacctatctacacaggaaatgcatgctgctcctttgaccaacaaatcagctagtccactt
gtacccccgaccgatacacacgactcgaccgtgtacacgaatacgaccgcgtctgggctt
tcaaagacaaaaacgaaacagaaacaatcccaggggaatgcgacgattgctactcaacag
aacggcacgaagagacgaaaagcttcgacagctggtcaagaaccgactgaagcgccgcag
gggtcctcaaagaagccccagagacatgtcgtcagtgccgatgctgctcatcggttcatt
ctgaaccccacatcatcacctttctcagaaacagaggaagaaatgatttcagaggtcgaa
ctcgccgacctttccactaagaagaccagtcgccagaatggatgtgttcaacccggtccg
gtcaagcggcgtcgtctcgtaacggtcaatagtgacacgcgtggtagagtgacccctcag
tctatcccccatccgcaggttacgaaggagcgacaggacttgtcgacctccgcgcaagca
tatggggcaatcaatgctcagatgaccgactcggctacattgcagaaaacccaactgaca
tcggcatcgccacctatatcaccatcgttgtcacccatactcaacatgtctttgttcgaa
cctctcccgccgcccattcccctctttcctcgagtctcgtccgctgctccaccgagcgtc
cctcaagaacctatcagatggtgggaagcagatgacgaagatgatctcgatcatctcgga
tctttcgccgtaacttcggagaaacgaaatgacaaaggatcatatccctctgtcacatct
caacctcccagtcaccccggcgagcgatacgatcgacatgccagcggataccatctgaac
tatcgcaatacccccctttcgacttcgatgggagccgcgatcgatgtcaaaggaacttgt
gagaatccggtcggaagctttggtgataatcaggggcaaggacatgtctatccggtcttt
gaagattgttcgccctccccttgtattgctcctcgatcggacacatggtcgaaggatgcc
ccaggcggcatgggatggggggaagctgatgaattagcctccgagcaggtgcaggtgaac
gggaaagggggtgaagagagggatgaagtggaagaagcgtttgaacggttcatgagttgg
tag
DBGET
integrated database retrieval system
