Tremella mesenterica: TREMEDRAFT_67653
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Entry
TREMEDRAFT_67653 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_67653
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_67653
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
TREMEDRAFT_67653
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
TREMEDRAFT_67653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_2
SCD
Cnd1
PMEI
Motif
Other DBs
NCBI-GeneID:
18497876
NCBI-ProteinID:
XP_007002988
JGI:
Treme1_67653
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MPSQTQTQVKLDFPEKLIQSGKKENTDALLKRIKTLHQRLAALEQDNVDVRSLDPIRKPL
IHQTILHHKDRGVKIYAACCLADVLRLYAPDAPYTGDELRDIFQFFLAQLENLRAPVIRP
LQPSRTKSNNADAPPQASQRITDVAYYSEYCYLLESLATIKSVVLACDVPDGDVLVARFF
QDFMDIIRPDMSKNLIRYMVDILVVLIEESASIPFGVMDCIIEQFTKPSTSSSSFQLIVE
VCNRASDKLYRPIYAHFAEIQTSHGRNPDSNDLKILTESHILLLNIYSHCPALLLNVIPL
LEENLKVADEIPLRQLSTKTLGTMFGERPVVGAGVADVAKAYPAAWRAWLGRRVDKALVV
RLAWVEAARGVLAKNPELRKEMEEALVDRIQDADERVRAAICKVIGSLDFETALHHLDAV
SLKAVGARMSDKKASVRQEAAAGLSKLWSLGYNEIESNNAHAIRQLGWVPDEMLRCLLRK
DAPPDLRNQITTIFRQVILPLPAKADDEQAWVDRLLLVASRLLNDESDESFVALERLTGL
RGYAKGASPYRTFIVSCEEYNGGVVDSAKELVKARLAFVTRAIASFFADADKARKDIEAF
AAANEARLYKLFKTCADPQTNLRDLIKARNEFLRKLEQSHTDILETFTFIIDDASFNIIN
KTAIPLILKAAQRPPAGRQGEAIAAASFRILKLIAKECAPMYRDYVQQLVIVMNEKKNDR
LCETALRALSAICKVEPESAPQDRKVAERAMKLALEGTVKQAKLAARFLANSKHKDLCVD
LIKDLIEQLKESGGDHILSHLRALAELALSAPSAFEQESEEIIRFVIDDIMAKPSPSTDD
TTEDAWTDEENLNIHDRAKLIGMKICAHRCLGYAREADAAVIFRPTLQMLVSILKHEGAV
NENTMEGGYARTHMRLRATLCLLKLAKVRVFDKAMTEYFQEITYTIQDPVFQVRNRFLHK
LLEVLPAQRLLPRWNVLPALSAKDPEAENILLAKGISASIMRTCANLGTAERIDRVEMPL
ARLMLLLSHHPDFTWDPENMKDIATFIALYLDCIATRDNVSLLYLIAGKIKTVRDSLLEA
PEDNENLYKLSELTQIIIRNRAQVHSWSITSYPGKIKLPRDIFHNLTDPAAVNRVIRSKY
LDDETDTWAKNLGKKAVNTAGPSRKFRDSSSTTPTKKRVRKTKPAARKKAKRTDEDEDDP
SESDDDDEAEGESSALSAPPSDDEAEDGVEGRGGKRGAKTKANRAVSKKMRKKKKELEQE
KSDSSGEDA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccagacccagacgcaggtgaagctagactttcctgagaagctgattcaatcg
ggcaagaaggagaatacggacgctttactcaaacgaatcaaaacccttcatcagagacta
gctgctctagaacaagataacgtcgatgtacgatctttggatcctattcggaaacctctt
atacaccaaactattttacatcacaaagatcggggcgtgaagatttatgccgcttgttgc
cttgccgatgtcttgaggttatacgcaccagatgcaccttacaccggggatgaactcaga
gacatcttccaatttttcctcgctcagctcgaaaatttgagagcacccgtcatacgtcct
ctgcaaccgagtaggacgaaatctaataatgcggacgctcctcctcaagcttctcagagg
atcaccgacgtggcatattactccgagtactgttacttgctagaaagtctggcgacgatc
aagagtgtggtgctggcctgtgatgtgccagatggggatgtgttggtggctcggtttttt
caagacttcatggacatcatccgtcctgatatgagcaaaaatctcatacgttacatggtc
gacattctcgtcgtgttgatcgaggaatcagcttccattccattcggagttatggattgt
atcattgagcaattcacaaagccatccacttccagttcttcattccagttgatcgtggaa
gtatgcaatcgtgcatccgacaaactgtacagaccgatatacgcccacttcgccgagatt
cagacttctcacgggcgtaatccggattcgaacgatctgaagatattgaccgaatctcac
attcttcttctcaacatctactcccactgtcccgctctactcctgaatgtcatacccctc
ctggaagagaacctgaaagttgctgatgagataccgttacgacaattgtcgacaaagacc
ttgggtaccatgtttggggaaagacccgtggtaggcgcaggagtggcagatgtggcaaaa
gcttatccggctgcatggcgtgcttggctaggaagaagagttgacaaggctttggtcgta
cgattggcgtgggtggaagctgcgcgtggtgtcttagcaaagaacccagaattgcggaag
gagatggaagaggcgctcgtagatcgaattcaggatgcggacgaaagagtgagagcggcc
atttgcaaagtgattggctctttggattttgagactgctcttcatcatcttgatgccgtc
tccttgaaggctgttggcgcgaggatgagcgacaaaaaggcatctgttcgacaagaggcg
gccgctggtctatccaaactctggtctttgggctacaacgagatcgagtccaacaatgct
catgccattcgtcaattgggttgggtacctgatgaaatgcttcgctgtctgttgcgcaaa
gatgcgcccccagacctcagaaatcaaatcacgacgatctttcgtcaagtgattcttcct
ttacctgccaaggccgacgatgagcaagcttgggttgaccgcctgctcctagtagcctca
aggttactgaacgacgaatctgacgagtcgtttgtggccttggaacgactgactgggttg
cggggatatgcaaaaggtgcttctccataccgaacattcatcgtctcttgtgaggaatac
aacggcggagtagtcgactcggccaaagaacttgtcaaggcccgtttggcatttgtgaca
cgagccatcgccagtttcttcgccgatgccgataaggccagaaaggacatcgaggcattc
gctgcagcaaatgaagctcgactatacaaattgttcaagacctgtgctgatccgcaaacc
aatctacgggatctgatcaaagctcgcaacgaatttctccgcaagctggaacaatcgcat
acggacattttggagacgtttactttcatcatcgatgacgcttcattcaatatcatcaac
aaaacggccatacccctaattctcaaagccgcccagcgtccgccggctggtcggcagggt
gaagctatagccgcagcttccttccgtatcttaaagttgatcgccaaggagtgtgcacca
atgtatcgtgactatgtgcaacagctggtgattgtcatgaacgagaagaaaaatgatcgt
ctgtgcgagactgctttacgtgcgttatcggcaatatgtaaagttgagccggagtcggca
ccacaggacaggaaggtagccgagagagctatgaaactagctttggagggaacggtcaaa
caggccaagcttgcagcacgattcttagcgaactccaaacacaaggatctgtgtgtggat
ctgatcaaagatctgatagaacaattgaaagaaagcggaggcgatcatatactttctcac
cttcgagctcttgcggaacttgctctgtcagctccatcagcgttcgagcaagaaagtgaa
gaaatcatccgctttgtcattgacgacatcatggccaaaccatctccatcgaccgacgat
acaaccgaagacgcttggaccgatgaagagaaccttaatatccacgatcgggccaaattg
ataggtatgaagatatgtgctcatagatgtttgggttatgcccgagaagcagatgctgcg
gtcatcttccgtccgactctacagatgctggtgtcgatcttgaaacatgaaggagctgtg
aatgagaacaccatggaaggaggttatgccaggacgcacatgcgcttacgagctactcta
tgtctgctgaaactggccaaagtacgagtgttcgataaagccatgacggagtatttccag
gagataacgtataccattcaagatccggtctttcaagtccgaaatcgattcttgcataaa
ctcttggaagtcttacctgctcaaagattattaccacggtggaacgttctccctgctttg
tcggcaaaagatccagaggcagagaatatcctcctggcaaaaggaatatcggcgtctatc
atgcgcacatgtgccaaccttggaacggccgaaagaattgatcgtgtggaaatgccacta
gcacgattaatgcttctcttatctcatcatcctgacttcacatgggatcctgagaatatg
aaagatatcgccaccttcatcgctttgtatctcgattgcatcgctacgagagacaacgta
tcccttctctatctcatagcgggaaagattaaaactgtccgagactctttactggaggct
cctgaggataacgagaatctgtacaaacttagcgagctcacccaaattatcatccgtaat
cgcgctcaagtacattcatggagtatcacctcttaccccgggaaaatcaaattacctagg
gatatcttccacaatctcactgatccggcggctgtcaatagagtaattcggtcgaaatat
ctggacgatgagactgacacgtgggctaagaatctcggaaagaaagcggtcaacactgca
ggaccaagtcggaaatttcgtgattcttcgtcaaccacgcctaccaaaaaacgagtccga
aagaccaaacctgctgcgcgaaagaaggccaaacggactgatgaagatgaggatgatccc
tcggaaagtgacgacgacgatgaggctgagggagaaagttcagcattatccgcccctccg
tcagatgatgaagcggaggatggtgtggaaggtagaggagggaagaggggagccaagaca
aaggcaaatcgtgcggttagtaagaagatgaggaagaagaagaaagaacttgagcaagaa
aagtctgactcgagtggagaagatgcttga
DBGET
integrated database retrieval system