Tremella mesenterica: TREMEDRAFT_67978
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Entry
TREMEDRAFT_67978 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tms01009
]
TREMEDRAFT_67978
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_67978
Enzymes [BR:
tms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
TREMEDRAFT_67978
Protein phosphatases and associated proteins [BR:
tms01009
]
HAD phosphatases
Fcp/Scp phosphatases
TREMEDRAFT_67978
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
TREMEDRAFT_67978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BSH_YknX
UvrC_RNaseH_dom
Collagen
Motif
Other DBs
NCBI-GeneID:
18497928
NCBI-ProteinID:
XP_007003040
JGI:
Treme1_67978
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MSDPPTPLTLPINLPYPIIITRVHIKTGQEVSRGTTLLEYAFTPFKLRQSSNDFSLDSDR
FGIPSEDEEVDIGELGNGPEGFQNGIGTEIGKGHKLELKEGDLIGSWESSIEGKIESIEK
FIKVGMKLEERYRGKTALLVQQPCSHPVQLHGMCGVCGADLQVEDYLSPFQESEAGPSRY
PGGYEIGHDATGVTVNTTEAKRLDEITRLDLLSQRKLSLIVDLDQTIIHTTVDPTVEEWL
IALRSEPSFHSSQQNSQEGQRTVRSTTPINTPDTVSPSSPNVESKDGEERLERLERTETQ
SSIPSRSTNSSWTDEENPNAEALRDVVMFSFEDELDFGTAGRDRRYRPRPRRYFTKPRPG
LAKFLEEMNKLYEMHVYTMGTRTYAEAIVGIVDPEGKYFGGRILSRDDSRNFTTKNLKRL
FPTDTSMVVVIDDRADVWGDCPNLVKVRPYDFFLGIGDINSAFLPPVSHDSPTSPSSPTS
STLPTLPIPPKPTSLHTLATGEEVSQEEELLLQQKMLDEVSEERPLAKLQEKLEDASVMT
DDPDDSKAGSEGVKKLHLQNEARTNSAGQFIKGELGREMWEEEKMIRIKEDNDDESSGEK
LVTREFKRKPTSTHALPKVLLLDPNDDELDRVEKLLRRIHRKFYNAYDRRLSDVDIPLAC
DCELIIPEIKAQVFDGCYFVFSGIIARDVEPETTSHWQWAEMFGARCQPTLTRKTTHCIT
TNAGTEKVYQASKLPGCKIVWVQWFYQSLSLWERQPEDEFSVESLPSSWGKSSVRRVSTE
GGHTSSASRVSTEGEETFSASRISPEGEVTSSGILSREGSSKLKAGQDEEIPLLEEENEF
SGELWPEGETDEMDVLEKEGVGMGDGWDEAALKELEDFAMDDESEFEWEKDDGSATPSPG
TPGTPGTPGTPGTPGKKRVRYADEEDLPLENIRDLPFDESLRKV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccacctacacctttaacactccctatcaaccttccatacccaatcatcatc
actcgtgtacatataaaaacaggtcaagaggtatcgagagggacaacattgttggaatac
gctttcacaccttttaaactacgacaatcatcgaatgacttttctctggactcagatagg
tttggtattcccagtgaggatgaagaagttgatattggtgaacttggaaatggacccgaa
ggatttcagaatggaattggaactgagattggtaaaggacataaattggaattgaaagaa
ggtgatttaatagggagttgggaaagttcaatagaggggaagattgaaagtatagaaaag
tttatcaaagtcgggatgaagttagaagagagatatagagggaaaacagctttactggta
caacaaccttgttctcatcctgtacaattacatggaatgtgtggtgtatgcggggcggat
cttcaagttgaagattacctttctccttttcaagaatcagaagctggaccttctagatat
cctggaggttatgaaataggacatgatgctactggtgtgactgtcaatacaactgaagct
aaacgtctggacgaaatcactcgactggatcttctttcacaacgtaaattaagtctcatc
gttgatcttgatcaaactatcatacataccacggttgatcctacggttgaagaatggctt
atcgctcttcgttcggaaccatctttccattcttctcaacaaaactcgcaagaaggtcaa
agaactgtcagatcaacaaccccaataaacacacctgatactgtctctcccagttccccc
aatgtggaaagtaaggatggagaggaacggttggaacggctagaacggaccgaaacccaa
tcttccatcccatcaagatcgacaaattcatcttggacagacgaggagaatccgaatgct
gaagctttgagagatgtggtgatgtttagttttgaagatgagttggatttcggtacggct
ggacgagatagaaggtatagacctagacctaggagatactttaccaagcctagacccggt
cttgcaaagtttttagaggagatgaacaagttgtacgaaatgcatgtgtacaccatgggt
acacgtacttacgcagaggctatcgtgggtattgtcgatcctgagggtaaatatttcggc
gggaggattttaagtagggatgatagtcgtaatttcacaaccaaaaaccttaaacgtctc
tttccaaccgataccagtatggtagtcgtcattgatgatcgtgcggatgtttggggtgat
tgtcctaatctggtcaaagttagaccatatgattttttcttgggtataggtgatataaat
tctgcttttttaccacctgtttcccatgattctcctacttccccttcttctcctacatcc
tctactttacctacacttcctattcctcctaaacctacatctctacacactttagcgacg
ggagaagaagtttctcaggaagaagaattgttattacaacagaaaatgttggatgaagtt
tctgaagaaagacctttggcgaaattacaagagaaattagaagatgcttcggtaatgacg
gatgatcctgacgattcaaaagctggttcagaaggtgtgaagaagctacatttgcagaat
gaggcccggacaaatagtgcgggccaatttataaagggggaattgggaagagaaatgtgg
gaggaagagaaaatgataagaataaaagaagataatgatgatgaatcttcgggagaaaag
ttggttacaagagaatttaaaagaaaaccaacttcaacacatgctttacctaaagtatta
ttattggatccgaatgatgatgagttggatagggtcgaaaagcttctacgacgaatacac
cgaaagttctacaacgcttatgatcgtcgattgtcagatgttgatattcctttggcttgc
gattgcgagctcatcattcccgagatcaaagcgcaggtctttgacggatgttatttcgtt
ttctcgggtatcatagcaagagatgtggaaccggaaacaacgtcgcattggcaatgggca
gaaatgttcggtgcaagatgtcaacccaccttaactcgaaagacgacccattgtataacc
accaacgccgggacagaaaaagtttatcaagcatccaaactaccaggatgtaagattgtt
tgggtacaatggttttatcaatcattatcattatgggaacgtcaaccagaagatgaattc
tctgttgaatctttaccttcttcttggggtaaatcttcagtccgtcgagtttctactgaa
ggaggacacacatcttcagcttctcgagtttctactgaaggagaagagacattttcagct
tctcggatctcccctgaaggagaagtgacatcttcaggtatactatcaagagaaggttcg
tcaaagttgaaagctggtcaagatgaggaaataccattgctagaagaagaaaatgaattc
tctggggaattatggccagaaggtgaaacggatgaaatggacgttttggagaaagaaggt
gttggaatgggtgatggttgggatgaagctgctttgaaagaattagaagatttcgctatg
gatgatgagtcagagtttgagtgggagaaggatgatggttctgctactccttcacctggt
actcccggtacaccgggaacaccggggacaccgggaacaccagggaaaaaacgtgtacga
tatgcggatgaagaggatttacctttggagaatatcagggatcttccttttgatgaaagc
ttgcggaaagtttag
DBGET
integrated database retrieval system
