Tremella mesenterica: TREMEDRAFT_68341
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Entry
TREMEDRAFT_68341 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06671
cohesin complex subunit SA-1/2
Organism
tms
Tremella mesenterica
Pathway
tms04111
Cell cycle - yeast
tms04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TREMEDRAFT_68341
04113 Meiosis - yeast
TREMEDRAFT_68341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_68341
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
TREMEDRAFT_68341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAG
HEAT_SCC3-SA
SCD
PDS5
TPR_26
Motif
Other DBs
NCBI-GeneID:
18497993
NCBI-ProteinID:
XP_007004286
JGI:
Treme1_68341
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MVEEQPRRGSRARKQVERYSKTVENGKRKQVQDEHEDESPSEEEEGDEDSEHEVTPRPLK
TNKRVLNGVTPKSTGTKQAKRSKKTIAGVAEVNDDVETNMNGDINGDGIKTDSNLFNAIL
AEGVSSDMIESWIEDYQNSADDETSEKSAVHQLVLLFIRCCGLKSTIEPDESVDQDGIAD
VLETIQDESVKTTLAVYPLISKAKPFRLFRNNLNVFITHFIKNLSLTPLLFESPETTSHT
SPLINVLLAWLHTMSSSPLRSIRHTSTYITLKINSALCDVAAEVSKDLSLRQRQRETEEK
KAGKNGVAQRKLKEAEEKVKEAHERKTTLEAFMKEIFDVLFVHRSRDADPAIRTDCLKEL
GVWVKKYPEEYVSSSYLVYFTRGCNDPNSHARLETAKALAALYSKETFVNNARTVTSRLL
PRLVEMALRDVDLSVRVNALSTIALIDKTGILQDEDEERREQIARLVFDQEPRVRKAVGG
FVRGVWEERVEKFKAEQAAVRGAKKKRASGITDDNMEKNLSWKALADLLVESFRALDQMD
GEPSTSRHKISFPLPESVLTTRANAAVEALWADFEELRDWEGLVDYLLLDHSTWEDDAWL
LDEDQENFMLQLLVACIKKEEKDEDKDERTKTLMKILPRLFTKHQADVARMAGILVIPEQ
MNLSLYLDMRKSAAYDQLWDDVTKQFLQHSDINVLTAAIKAVNHLCSNASMSPSNTTKMN
ELQEALLASLRDAIDGEDVATFSIDEDKVAALEAILLRIALLARSRDIVSVMEDEEGGQS
SGWEIVCAFAERGAVGYKEEAKLVEHALHVIFVHISWLFKRFSADDINNDDKVSDLRDKR
DRVLDTLRRLALRDKTNTSESVSRQAFVYFINLHILFSSRNAKSANAHPAVKACPLSMAD
ELQHRLGGSFQAMVDRYASDREESSEEEQVEFSGMSAERVEEELLFLQAVSAFVGAIRCG
VLDVEHAKEPLAYFGQFGQTYDAVVRKLVDVLKDEGIYNRESDTVQHVSASALQSSFSNF
LETESTEPTATISLARLLASAFIIYGTHFSVLRQIHPNDIYDLHLSLLSYVQRRLISYIS
SERSTKSREAKQRFQQNRHQALTFFKPLILLITPVTPQDAVKLRRRIKEMEKELGVEVTG
HKAWDPWKAYEKKLVQIANRDPQAKAAIEDNEQGQGEATDGDEQDVPVRPAKRQRQMTQE
PEDRSNEQQGNEEEEEVENEQESEVEEERGDLSMEDLHLDNEEIDLAFDDGAMGMDVDLD
LDDVLGPNTQNVLRERSLSVEPGARRKRRTRY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagagcaacccaggagaggatcgagagctcgaaaacaagtggagaggtactca
aaaacagtcgagaacggaaagaggaagcaagtccaagatgagcacgaggatgagtctcca
tcggaagaagaggaaggggacgaagatagcgagcatgaagtcactccgagacctctcaag
accaataagcgagtgctcaacggcgtcacgcccaaatcaaccggcacgaaacaggcgaag
agaagcaagaagacaatcgctggagttgcagaggtcaatgacgatgtcgaaaccaacatg
aacggggacatcaatggggatggtatcaagaccgattcgaatctcttcaatgctattctc
gctgaaggtgtgagcagcgatatgatagagagctggatcgaggattatcagaactcggcc
gacgacgaaacatccgagaaatctgctgtacatcagctggttcttctcttcattcgttgt
tgtggcctcaagtccactatcgaacctgacgagtctgttgatcaagacggtatcgcagac
gttctggaaaccatccaggatgaaagtgtaaagactactctagcggtgtaccccctcatc
agtaaagcgaagcccttccgcttgttccgaaacaaccttaacgtcttcatcactcatttc
atcaaaaacttgtccctcacgcctctcctctttgagtcccccgagaccacttcacataca
tcacccttgatcaatgtccttctggcttggctacatacgatgtcatcttcgccgcttcgc
tctatacggcatacgtccacgtatatcactctcaagatcaactcggcgctttgcgacgtt
gctgcggaagtcagcaaagacctgagcttgcgacaacgtcaacgtgagactgaagagaag
aaggctgggaaaaacggtgttgctcagagaaagctaaaagaggctgaagagaaggtgaag
gaagcccatgagcgcaaaaccacactagaagctttcatgaaggagatttttgacgtgttg
ttcgttcatagatcccgagatgccgaccctgccatccgaaccgactgtctcaaagaactg
ggggtatgggtgaaaaagtaccccgaggaatacgtatcctcgtcgtacctcgtatacttc
actcgtggttgcaatgaccctaactcacacgctcgactcgagactgccaaagctctcgca
gcactctactctaaagagacattcgtaaacaacgcccgtactgtgacttctcgtctgctg
cccagactggtcgagatggctcttcgtgatgttgacctttccgtacgagtcaacgccctg
tccaccatagccttaatcgacaagacgggtatccttcaagatgaagatgaggaacgtaga
gaacagatcgctagactggtatttgaccaagagcctcgtgtacgaaaagctgtgggagga
ttcgtccgaggagtatgggaagagcgggtggagaaattcaaggcggaacaagctgcagtt
cgaggcgcaaagaagaaacgagcttctggtatcacagacgacaatatggagaaaaacctc
agctggaaagccctcgccgatctgctggtggaaagttttcgggctctcgaccaaatggat
ggcgagcccagtacgtccagacacaaaatcagctttcctttgcctgaaagcgtactcacc
acccgtgcgaacgctgctgtagaagccttgtgggcggatttcgaggagctcagggattgg
gagggtctcgtggactatttgcttctagatcattcaacatgggaagatgacgcttggttg
ttggacgaggaccaggagaatttcatgctgcaattacttgtagcatgcatcaagaaagaa
gagaaggacgaggacaaggacgagcgaaccaaaacgctcatgaagatactaccccgcttg
ttcaccaaacatcaagccgatgtggcacgaatggcaggaatacttgtcattcctgagcaa
atgaatctgtccttatatcttgacatgcgcaaatcagctgcctacgatcagctctgggac
gatgtgaccaagcagtttttgcaacattccgatataaacgttttgacagccgcgatcaag
gcggtcaatcatctctgctcgaatgcgtcgatgtcaccatcaaacacaactaaaatgaac
gagttgcaagaagccttgctcgcttccttgagagacgcgatcgacggagaagatgtagct
accttttccatcgacgaggataaagtggcggctttggaagcgatcctacttcggatcgca
cttttagcgcggagtcgggatatcgtcagcgtaatggaagatgaggaaggcggtcagagc
agtggttgggagattgtgtgtgcattcgccgaacgaggtgctgtcgggtacaaagaagaa
gccaagttggtagagcacgctttacatgtcatattcgtccatatcagttggctcttcaag
agattttctgcggacgacatcaataatgacgacaaagtctccgacctcagagataagcgg
gatcgagttctcgacaccttacgtcgattggcgttgagagacaaaaccaacacttccgaa
tccgttagtagacaagcattcgtgtacttcatcaacctccatatcctcttctcctcgaga
aacgccaaatctgcaaatgctcatccggccgtcaaagcatgtccgctctccatggccgac
gagttgcagcaccgtcttgggggttcatttcaagccatggtcgatcgatatgcctctgat
cgggaagaatcatctgaagaggaacaagtagaattttcggggatgtctgcggaacgagta
gaggaagaattgttgttcctccaagctgtttctgcgttcgttggtgcgataagatgtggt
gttttggatgtcgaacatgccaaagagcccttggcgtattttgggcaatttggacaaacg
tatgatgcggtagtgcggaaattggtggatgtattgaaggatgaggggatatacaataga
gaaagtgatactgtacaacatgtctcagctagcgctctgcaatcttcattctccaatttc
ctcgagactgaatcgacagaacccacggcaaccatatcactcgctcgtcttctcgcctca
gccttcatcatctatggcacccacttttccgtcctgcgacaaattcatccaaacgacata
tacgatcttcacctctctctcctttcttacgttcaacgacgattgatatcgtacatttcc
tcggagagaagtaccaaatcccgtgaggctaaacaacgttttcaacaaaatcgacatcaa
gcattaacgttcttcaaacccctcatacttctcatcactccagtcactccgcaggatgcg
gtgaaactacgacgtcgtataaaggaaatggagaaagagttaggcgtggaagtaacgggt
cataaagcttgggatccttggaaggcttatgaaaagaaattggtacagatagctaatcga
gatcctcaggcaaaagcggctatcgaagataatgaacaaggacagggtgaagcgacagat
ggggatgaacaagatgttcctgtcagacctgcaaaacgtcaaagacagatgactcaagag
ccggaagatcgatccaacgagcaacagggaaatgaggaggaggaggaagtcgagaatgaa
caggaaagtgaagtcgaagaggagagaggagatctttcgatggaagatctacatttggac
aatgaagagattgatttagcttttgatgatggagcaatgggtatggatgtggatttggat
ttggatgatgtgttgggaccaaatacccagaatgtgttgagagaaagaagtttgagtgtt
gaacctggtgctagacgtaaacgtcggactaggtattga
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