Tremella mesenterica: TREMEDRAFT_68499
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Entry
TREMEDRAFT_68499 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_68499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_68499
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TREMEDRAFT_68499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_33
AAA_22
AAA_5
AAA_14
AAA_28
TIP49
Viral_helicase1
nSTAND3
AAA_3
AAA_17
AAA_18
RNA_helicase
TsaE
AAA_2
Cytidylate_kin2
NPHP3_N
ABC_tran
Zeta_toxin
Mg_chelatase
DUF815
Sigma54_activat
IstB_IS21
AAA_7
NB-ARC
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
18498016
NCBI-ProteinID:
XP_007004309
JGI:
Treme1_68499
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MSIFPIDLNKQAIAGWQTSSSSPRPEGVKHPPSINGNEASTSTSNSNPTSTPVPTEKPRS
VKRLRPNPVNLAEKYRPPDLRLSMLGGLDTQITQLLEIVALPLQHPEIYAHTGVSRPRGV
LLHGVPGGGKTQLVKCLAGELGLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKLAPCLL
FLDEVDAITPKRETAQREMERRIVAQLLTCMDDMASSEEPVVIIGATNRPDSLDTALRRA
GRFDHEIEMGVPGVEAREQILKVLCTPLKLTGDVDFRWLAKATPGYVGADLTSLVTEAGV
IAVKRIFEDLSSQPLSTSTPFTRPPSTDIDDQSFAISNGDIDIDPPIQSLRNVEISSDGP
LSSLSLQLRQTPIARFLLTHPYPLPPESLDVLSIHADDFVQALKIVQPSAKREGFATIPD
VSWSDIGALGEVRDELHMAIVQPIRRPELFAVVGIEAPSGVLLWGPPGCGKTLLAKAVAN
ESRANFISVKGPELLNKYVGESERAVRQVFARARASSPCVIFFDELDALVPRRDESMSES
SARVVNTLLTELDGLNSRKSVYVIGATNRPDMIDPAMVRPGRLDKLLYVDLPTPSERVEI
LKTHTKRTPIPDSAWSEIEVLVTGDQCDGYSGADLAALVREAATLALRKALESMGAFETD
LDVGGSGNQFGDVGEGRGTNGVRVGIEEFKRAAEKTKPSVSREQRLRYERMRDKYAGVPT
KGRRREENGLGDVNMSI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcttccctatagatcttaacaaacaagccatagctggttggcaaacctcctca
tcatctccacgaccagaaggtgtcaaacatcctccctctatcaacggaaatgaagcttca
acctcaacctcaaattcgaacccaacttccacaccagtacctacagaaaaaccccggagt
gttaaacgtcttcgacccaatccagtcaatctagcagaaaaatatcgtcctccagatcta
cgtctgtcaatgttgggagggttagacactcaaatcactcaattactcgagattgtagct
ttacctttacaacatccagagatatacgctcataccggtgtttcaagaccacgaggagtt
ttattacatggtgttccaggaggaggtaaaacacaattagtcaaatgtctagcaggtgaa
ttgggattacctttcatatccgtttcagcaccttcgatagtttctggtatgtctggagaa
tctgagaaaactttgagagatacttttgatgaagctaagaaattggcaccgtgtttgttg
tttttggatgaggttgatgctattacacctaagagagagactgcacagagggagatggag
aggaggatagtggctcaattgttgacttgtatggatgacatggcaagttcagaagaaccc
gtagtcatcataggagcaaccaaccgacctgactctttggacactgcccttcgccgagca
gggagatttgatcatgagatcgaaatgggtgttcctggtgtagaagctcgagaacaaatt
cttaaagtgctttgcacccctctaaaactcacaggtgatgtagattttcgatggttggca
aaagccacaccagggtatgtcggtgccgatcttacctctttggtaactgaagcaggggtc
atcgccgtcaaacgtatttttgaagatctatcttcccaacctctctccaccagtaccccc
ttcacacgaccaccttctaccgatatcgatgaccaatcgtttgccatttccaatggtgat
atcgacatagacccacctatacaatcattacgaaatgtcgagatatcttccgatggtcca
ctctcatcattatcccttcaacttcgtcaaactccaatcgctcgatttctgctcactcat
ccttacccactacctcctgagagcctcgatgtcctctccatccacgccgatgattttgtc
caagcattaaagattgtccaaccttcagctaaacgtgaaggattcgcaactatccctgat
gtgagttggtcggatatcggtgcattgggagaagtcagggacgaattacatatggctatt
gtgcaacctatcagaagaccggaacttttcgctgtagtgggtattgaggcaccctctggg
gtattactttggggtccaccgggatgcgggaaaactttattggcgaaggctgtagcgaat
gagtcaagagcgaatttcatcagtgtcaaaggtccagaattgttgaataagtatgttggt
gagagtgagagagcggttagacaagtattcgcaagagcaagagctagttcaccctgtgtc
atcttttttgacgaattggacgctttagtaccacgtcgtgatgaatcaatgtccgaatca
tcagctcgagtagtcaacaccctcctcaccgaactcgatggactcaattcgcgcaaatca
gtctatgtgataggagctaccaatcgacccgatatgatcgatccagctatggtccgtcca
ggtcgtcttgataaactactctatgttgatcttccaacaccttccgaacgtgtggaaatc
ttgaaaactcataccaaacgtactcctataccggattccgcctggtcagaaatcgaggtt
ttagtcactggagatcaatgtgatggatattcaggagctgatttagccgctttagtaaga
gaagcagctactttagctttaagaaaagcgttggaaagtatgggagcattcgaaactgat
ttagatgtgggtggaagtggtaatcaatttggagatgttggagaaggaagaggaacgaat
ggagtgagagttggtattgaagaattcaaacgggctgctgaaaagactaaacctagtgtt
tcgagagaacagagattgagatatgagaggatgagagataaatatgctggtgtacctact
aagggtagaagaagggaagagaatggtttaggggatgtcaatatgagtatatga
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