Tremella mesenterica: TREMEDRAFT_68703
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Entry
TREMEDRAFT_68703 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tms
Tremella mesenterica
Pathway
tms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TREMEDRAFT_68703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_68703
Enzymes [BR:
tms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TREMEDRAFT_68703
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TREMEDRAFT_68703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
18498046
NCBI-ProteinID:
XP_007004789
JGI:
Treme1_68703
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MIKTLSRPPFPSGWGSIPTTLSNLSLSNTLPVGQSFLWHKRTLPAAGPDEPLEEYSRAIR
NPCRVIFLRQSIHRLHYVSLLPDGSTSKDEETRQWLEDYFQLVNYPDLSLLYKEWRDRDT
ELFGKIEFDKKAIGVRVLRQDPWECLISFITSTNNHITRISSLMHKLSINYSKPLFTIEQ
FEGSSSITYHPFPIPEDFPDSFETNLRQLGFGYRASFIESSIKSLRQQFGSNPGSIEKGL
VDLRKKDLDVIGECLISLKGVGRKVADCVMLMSLDQPSLIPVDTHVASIAARHPSFPSRL
RNKTMSKQMYDDIQLFLADRWGPLGGWCQAVMFAADLPPIRPAEVSCSVSDELGFCESKN
VVMVDQIIQDVKPISVAKSRSKRSKRTSDGVDNGVVLEHKRTRRVSGTPRSTS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacactctcaaggccacctttcccttctggctggggcagtataccaacgact
ctctccaatctcagtctttccaacacccttcctgtcggtcaatcttttctctggcacaaa
cgaactcttcctgctgctggaccagatgaacccttggaggaatattcaagggcgattcgt
aacccttgccgagtgattttcctccgtcaatcgatccatcgacttcactacgtttcacta
ttacccgatggatctacgagcaaagatgaagaaacgcgtcaatggttagaagattatttt
caacttgtcaactatcccgacctttctcttttatataaagaatggagagatcgagatact
gaattatttgggaagatagagtttgataaaaaagctataggagtacgagtattaagacaa
gatccttgggaatgtttaatttcattcataacttcaactaataatcatatcactcgaata
tcatcattaatgcataaattaagtataaattattctaaacctttattcaccattgaacaa
ttcgaaggttcatcatccatcacatatcacccattcccaattcctgaggatttcccagat
tccttcgaaacgaatttacgtcaactaggattcggttatagagctagtttcatcgaaagt
tcaatcaagtcattacgtcaacaattcggttcgaatccaggatctatagagaaaggtttg
gttgatttgaggaaaaaggatttagatgtgataggggaatgtttgatatcgttaaaagga
gtcggacgaaaagttgccgattgtgtaatgttaatgtctttagatcaaccatctttaatt
cctgtagatacccatgttgcttctatagcggcaagacatccttctttcccatcaagacta
cgtaacaaaaccatgtcgaaacagatgtatgacgatattcaacttttccttgctgatcga
tggggtccattaggaggatggtgtcaagctgtcatgtttgctgctgatttacctcccatc
cgaccggcggaggtgtcgtgctcggtatcagacgaattaggcttctgcgagtcaaaaaat
gtcgttatggtcgatcaaatcatccaagacgtcaaaccgatatccgtagccaaatcacgt
tctaagcgatcaaaacgtaccagcgatggggtcgataatggagttgtacttgaacacaag
agaactcggagagtatctgggacacccagatcgacttcgtaa
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