Tremella mesenterica: TREMEDRAFT_68987
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Entry
TREMEDRAFT_68987 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_68987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_68987
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_68987
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
TREMEDRAFT_68987
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
TREMEDRAFT_68987
RSF complex
TREMEDRAFT_68987
WICH complex
TREMEDRAFT_68987
B-WICH complex
TREMEDRAFT_68987
NORC complex
TREMEDRAFT_68987
BRF complex
TREMEDRAFT_68987
NuRF complex (fruit fly)
TREMEDRAFT_68987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
DEAD_2
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
18498088
NCBI-ProteinID:
XP_007005214
JGI:
Treme1_68987
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MNPLLAASNVLNPPNANDEDKLSDYVPNSRDISVSRAPSAVASDERQSNTAPVTPEDSDG
EVELGEDDELDEDDVVASASKTTPSASRRVKEAQAKKAANAERKAQIADIGKKRGAVEEA
KFADSMKRFNYLLGQTELFQHFIDLKKTREPEFAAMLDAQLSARNGAKGKKKAEDHRHRK
SEKEEDEELLKEEDETDESFVFEESPPYVKGGKMRDYQVQGLNWMISLHHNGINGILADE
MGLGKTLQTIAFLGYLKFHRETPGPHLIVVPKSTLDNWAREVEKWVPGFRTIILQGTKEE
RAVLVTNRILTQEFDILITSYEMCMREKSTLKKFSWEYIIIDEAHRIKNVDSLLSQIIRT
FVSRGRLLITGTPLQNNLQELWALLNFILPDVFSSSEDFDAWFKTKDDTDPDAIVKQLHK
VLRPFLLRRVKADVEHSLLPKKEINLYVGMTEMQRKWYRMLLEKDIDAVNGAGGKKEGKT
RLLNIVMQLRKCCNHPYPEPGPPYTTDQHLIDNAGKMVILDKLLKSMQAKGSRVLIFSQM
SRVLDILEDYCQFRGFQYCRIDGGTAHEDRISAIDDYNAPGSEKFVFLLTTRAGGLGINL
VTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILERATQKLKLD
QLVIQEGRAQQPAKLASNKDELLDMIQHGAEKIINTSQSMLIDDDIDEIIKRGEEKTQEL
VSKYAGLDLDALNNFKSESLVNTWEGEDFAHKRKGLIWIEPAKRERKGNYSVDQYYRDNL
KLTASKPDKPKVVRPPKQVHINDFQFFPPRLVELQNREFDAHRKAQKYVVPTREPEEGET
AEEVEAERVEEQERINNAVPLTEEEVAEKDALAGEGFLEWKRQHFLSFIKGLEKYGRDNL
DKVALEVSDKTEEEVREYAAVFFDRYHELKDADKYMDRIIAGEAKLREQQDRIDALHKKV
RSYTYPMQELKIHYGQNKGKSYSDEEDRFLLVRMHHHGLDRDDCYELIKRDIGEWPLFRF
DWFFKSRTPDELRRRGATLLLCIMKDKDADEEKEKKPKAGGKKRPIEELKAGSRDTTPAS
TGDKRANKKKKT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttgcttgcggcaagcaatgtgttaaacccgccaaatgccaatgatgaggac
aagctgtcggactacgtaccaaacagtcgtgatatttctgtttcacgcgctccttccgca
gtcgcatcagatgagagacaaagcaatactgcaccggtcactccagaggacagtgatggt
gaagtcgagctcggagaagatgatgagctggacgaggatgatgtcgtagcttctgcatca
aagacgacaccctccgcttcacgtcgagtaaaggaagctcaggctaagaaagccgcaaac
gccgagcgtaaagctcagatcgccgacataggcaagaagagaggagctgtagaggaagcc
aagtttgcggactctatgaaacgcttcaactacctgctcggtcagacagagctatttcaa
catttcatagatctcaaaaaaaccagggaaccagagtttgcggcgatgctggacgcgcag
ctgagcgcacgaaatggggccaaaggcaagaagaaggccgaggatcatcgacatcgcaaa
tctgagaaagaggaagatgaggagctcctgaaagaggaggatgagaccgacgagtcgttt
gtgttcgaagagagccctccttatgtcaagggcggcaaaatgcgggattatcaagttcaa
ggtctgaactggatgatctctctacaccacaacggtattaacgggatccttgccgacgag
atgggcttaggaaaaacactccagactatcgcttttctcggctatctgaaatttcaccga
gaaactcccggtcctcacctgattgttgtgccaaaatctacacttgataattgggcacga
gaggtcgagaaatgggtacccggtttcaggaccataattctgcagggaacgaaagaagaa
agggctgttctcgtcaccaaccgaattctgactcaggaattcgacatcctcatcacatca
tatgagatgtgcatgcgcgagaagtccacactaaagaaattctcctgggagtatatcatc
attgacgaagcccatcggatcaaaaacgtcgactcactgctgtcccagatcatacgaaca
ttcgtcagcagaggtaggctcttaatcactggcactcctctacaaaacaatttgcaagag
ctgtgggcattgttgaacttcattctgcccgatgtcttctcttcgagtgaagactttgac
gcttggttcaagaccaaagacgacacggaccctgatgctattgtcaaacagcttcacaaa
gtcctccggcctttcttgctccgtcgagtcaaggccgacgtggagcactcgcttctgccc
aagaaagagatcaatctatatgtcggcatgacggaaatgcagagaaaatggtacaggatg
ctgttggaaaaagacatagatgcggtgaatggtgcaggcggaaaaaaggaaggaaagacg
agattgcttaacattgtgatgcagctgcgaaaatgctgcaatcacccatatccggaaccc
ggtcccccttacacaaccgaccagcacctcatcgacaacgcaggtaaaatggtcatcctc
gacaagctgctcaaatctatgcaggccaaaggctctcgagtcctcatattctcccaaatg
agccgtgttcttgatatcctcgaggactactgtcaattccggggtttccaatattgcagg
attgacggtggaacagcccacgaagatcgaatcagtgccatagacgattacaatgccccg
ggtagcgagaaattcgtcttcctcttgactactcgtgccggaggattgggcatcaacttg
gtcaccgccgatattgttgtgcttttcgacagcgattggaatccccaggcggacttgcaa
gcaatggatcgagcacatcgtatcggtcagaccaagcaggtttatgtcttccgattcatc
acacaggatgctgtggaggagcgaatcttggagcgtgctactcagaaactcaaactcgat
caattggtcatccaagaaggtcgggctcagcaaccggcgaaactggcgtcaaacaaggat
gaattgcttgacatgatacaacatggtgctgaaaagatcatcaatacctctcagagtatg
ttgatcgacgacgacatcgatgagatcatcaagcgtggggaggagaagactcaagagctc
gtctccaaatatgccggccttgacctagacgccttgaacaacttcaagtccgaaagcctc
gtcaacacttgggaaggagaagacttcgctcataagaggaaaggactgatctggatcgag
ccagccaagagggagagaaagggcaattactcggtcgaccaatactatcgcgacaacctc
aagttgaccgccagcaagccagacaagccaaaagtggtgcggccacccaagcaggttcac
atcaacgacttccaattcttccctccacgacttgtcgaattgcaaaatcgggagtttgac
gctcaccgaaaagctcagaagtacgtggtgcctactcgtgagcccgaagagggcgaaacg
gccgaagaagttgaggccgaacgggtcgaggagcaggaacggatcaataatgctgtgcct
ttgacagaggaagaagtcgcggagaaagatgcacttgccggtgagggcttcttagaatgg
aaacggcaacatttcctgtcttttatcaaaggtctggagaagtacgggagagacaatctt
gacaaggtcgcattggaggtctcagacaagacggaggaagaagtcagagagtatgcggcg
gtgttcttcgacagatatcatgagctaaaggatgcggacaaatacatggatcgtatcatt
gctggcgaggctaaactccgcgagcaacaagaccggatcgatgctcttcacaaaaaagtc
agatcgtacacgtaccccatgcaggagctcaagatacattatggacaaaacaagggcaag
tcatactcggacgaagaagatcgtttcctgttggtcagaatgcaccaccatggactggac
agggatgattgctacgagttgatcaagagggatatcggagaatggcccttgttccgcttt
gactggtttttcaagtcccgtacgcccgatgagctgcgtaggcgtggggcgaccttacta
ctgtgtatcatgaaagataaagacgcggatgaagaaaaggagaagaaacccaaggctggt
gggaagaaacgaccgatcgaggagctcaaggcgggctcgagggatacgacccccgcctcg
accggagataagagagccaataagaagaaaaagacatga
DBGET
integrated database retrieval system
