Tremella mesenterica: TREMEDRAFT_69538
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Entry
TREMEDRAFT_69538 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_69538
Enzymes [BR:
tms01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
TREMEDRAFT_69538
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
TREMEDRAFT_69538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM
Radical_SAM_C
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
18498160
NCBI-ProteinID:
XP_007006294
JGI:
Treme1_69538
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MIAPPQSQNELHLLASSAIVRELIALHTAASSSSHEGKEPNLGLLRNRYAKKYGLSVVPR
LTDILAAVPDEWKDRLRGWLKARPVRTASGVAVVAVMCKPHRCPHVAMTGNICVYCPGGP
DSDFEYSTQSYTGYEPTSMRAIRARYDPYEQTKGRVEQLKGLGHSVDKVEIILMGGTFMS
MPEDYRHKFIAGLHNALSGHTGDDVDEAVKFSEQSRIKCVGITIETRPDYCLKPHLSQML
RYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMAKDAGYKIVAHMMPDLPNCGTER
DICNFRNYPPNALVDIVARIMALVPPWTTVYRVQRDIPMPLVSSGVENGNLRELALARMK
DFGAECRDVRYREVGLHEIHNRVRPQDLELLRRDYAANGGWETFLSYEDPEQDILVGLLR
LRKCSEDGTFRKELVGMEGGCSLVRELHVYGTAAPVHSRDPKKFQHQGIGTLLMEEAERI
AKDEHGSCRIAVISGVGTRDYYRRLGYWLDGPYMVKDL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatagcacctcctcagagtcagaacgaacttcatctccttgcctcatcggctatcgtc
cgcgaactcatcgctctgcacactgccgcttcttcctcctctcacgaaggtaaagaaccc
aatctcggtcttcttcgcaacaggtatgctaagaagtacggtctcagcgtcgttcccagg
ttgacagatatcctcgctgctgtacctgacgaatggaaagataggctcagaggctggctc
aaggcgagacccgtcaggacggccagtggcgtggcggtggtagctgtcatgtgtaaacct
catcgatgtccgcatgtggctatgactgggaacatttgcgtgtactgcccaggaggccca
gattcggactttgaatactcgacgcaatcgtacacaggatacgagcccacgtcgatgaga
gctatccgggccagatatgatccatacgagcagaccaaaggacgtgttgaacaacttaag
ggtttgggacacagtgtggataaagttgagattattcttatgggaggtactttcatgtca
atgccggaagactatcgacacaagtttatagctgggctgcataatgcactgagtgggcat
acgggagatgatgtggatgaggctgtcaagttttcagagcagagcagaatcaaatgtgtc
ggcattaccattgaaactcgtcccgattactgcctcaagccccatttgagtcaaatgttg
cgatacggctgtacgcgactcgaaatcggcgttcaatcagtctacgaagacgtagctaga
gacaccaaccgaggtcataccgtccgagccgtctctgaatcttttcacatggccaaagat
gccggatacaagatcgtggcacatatgatgccggatttaccgaattgtgggactgaaagg
gatatatgcaatttcagaaattatcctcccaacgccctcgtcgacatcgtcgcacgcatc
atggccctagtccctccttggaccacagtgtatcgggttcaacgtgatatccctatgcct
ctcgtttcctccggcgtggaaaatggtaacctccgggagttggctttggcacggatgaaa
gattttggtgcggaatgtcgagatgtccgctatcgcgaggttgggttgcacgaaatacat
aatcgtgtcagaccccaagacctggaattgttgagaagagattacgccgctaatggcgga
tgggaaactttcctatcgtatgaagatccagagcaggatatcttggtgggattgttaaga
ttgagaaaatgttcggaagatggaacgttcagaaaggaattggtaggtatggaaggtggg
tgtagtttggttagagagctgcacgtatacggtacagcagcacctgttcattcccgtgac
ccaaagaaatttcaacatcaaggtataggtactcttttgatggaagaagcagaacgtata
gctaaagatgaacatggaagttgtagaatagctgttatttcaggtgttggaacaagagat
tattatagacgtcttggatattggttagatggaccttatatggtcaaagatttgtaa
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integrated database retrieval system
