Tremella mesenterica: TREMEDRAFT_69686
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Entry
TREMEDRAFT_69686 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_69686
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_69686
Spliceosome [BR:
tms03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TREMEDRAFT_69686
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
TREMEDRAFT_69686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Suf
RRM_occluded
HAT_Syf1_CNRKL1_C
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
18498184
NCBI-ProteinID:
XP_007006640
JGI:
Treme1_69686
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MEVDHVESHGTEQQADSVQQLDHSVEDAANELGELLVKLDLQPLSVPLLSRQICLLRRLG
MIEEALEARLKLSSLIMLDQDTWLSYFDDLFESSVQPVTLDVFVEMLERFDQAEKDYLSS
AVLVRHVEFILRCTSHLYPPPEDSQLSKPSISVEADVAEFLSEETVRGMLQGVVQRGNQL
LGESHLLWQPWIDWELDLMKTKIDEEQRSSHIDRIHAAYLDRMTVPHSTLDATSSSYSSF
CSQYAPNTYEQRLINATNAAQNAKFKWNGEKRHGKTREDLEQELAYAPDITAQLQTFASY
ISWETDQHAKHPKIPGKSPATDVFLTRGVFERTIATYGRIVAALQSTIITTPPPSTASEM
ENTAKKGKGKAKSTREIEKARREETEATTQVTIQAYREAEAGIWSQFAAWLEANGHSDAV
QDIKSRGARACPEVGSIWCSLLTHMECHGAALEDLTTTFEKAINLGTLGRKGVPCTALVD
VFLHRAAFESRAEPVEDVEGDYHPVIQTLSRGLEAVVKFSQAGDPSLRLEKFLLDWAESR
APKFLNETISLLSKPSKSRLSSYQMTILRSGIETRRGNIEEARNLFTTALQRSDLDWPEA
VYEAFIQFENVHGDLDTVLDANKRIAKAQEKLAKRREKAAQEQTAQYQVVAQSGTSATTA
ELLVPSTAVAVDGQGLSTAAPVTTAQASTSQEAENTPLKRQCGPIRETTILSEHEHDHIA
ALVEFRDVDSIPDALTRDRKKLAGNEVAVSMLWRSTLFITNFPRSMDDAGIRQLLSSYGL
ILQTRWPSRKYADSRRFCYVTMDSPASAQNALQLHGQPTTEGFNLTVLISDPSAKARRSD
TSKTTLFVGGLTAKSTAPDVEKLFSQRGAVQHVNLGWDQAKQICKGFAFVEMATEADAQE
ALNLHGSHINGRYLKVEMHDPNHVTKKRTTSAPREAIERRARTVRLSNLPSDTQEGLLQQ
ALEKIVSVKRLELFSKVHQAVVELESQVDAGLLLLQSEPFIFGGATIEIREEQRRPLPHK
SDHTPPAAGQATVAPSTSLSFAPRAARRGGKAIGKGRQAPPQDKSLHPSFVKASTHSNNE
TDSGQVDFRAIVAAKNKQRQGKLLEARHEQSVGGESQNGVKRSPEEASEAPGAKRSKN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggatcatgtcgagtcgcatgggactgagcagcaagcggacagcgtccaacag
ctcgatcactcagtagaagacgcagccaacgagctcggtgagctcttggtcaagctcgac
cttcagccattgagcgtacctctcctcagtcggcagatatgtctccttcgcaggttggga
atgatagaggaagcattggaggctcgactcaaactttcttcgctgatcatgctcgatcaa
gacacttggctctcgtactttgatgatctcttcgaatcctccgtgcagcccgtgactttg
gacgtcttcgtcgagatgctggagcgttttgatcaagctgaaaaggactacttatccagc
gctgtgctggtacgacatgtcgagttcatcctacgatgcacctctcacctctatccccct
cccgaagactcccagctctctaaaccttccatcagcgtcgaggcagatgtggctgagttt
ctgtccgaggagacagtacggggaatgcttcagggcgtggtacagcgaggcaatcaatta
ctgggcgagagtcatctgctatggcaaccatggatcgattgggaattagatctaatgaag
acgaaaatcgatgaggagcagaggtcctctcacatcgacagaatacatgcagcatacctg
gaccgtatgactgtcccgcactccaccttggatgccacgtctagctcttattcgagcttc
tgctcccaatatgccccgaatacctatgaacaacgtctgataaacgccacgaacgccgca
cagaatgcgaaattcaagtggaatggagagaaacgacacggcaagacaagagaggacctt
gaacaagaactggcctatgcacctgatatcactgcacaacttcaaacatttgcgtcatat
atatcctgggagaccgatcaacacgccaagcatcctaaaataccgggcaagtcacctgct
accgatgttttcttaactcgcggagtcttcgagaggacaatcgcaacgtatgggcggatt
gtggcagctttacaatccacgataatcactactcccccgccgtcaaccgcatccgaaatg
gaaaataccgccaagaaggggaagggaaaggccaaatcgaccagagaaatcgagaaggcc
cgccgagaagagacggaggccaccactcaggtcaccattcaggcgtacagagaagcggag
gcgggaatctggagtcagtttgcggcttggcttgaagcgaatggtcactcggatgctgtg
caagacatcaaatctcgcggggcaagagcatgcccagaggttggatccatttggtgctcc
ttattaactcatatggaatgtcatggcgctgcgcttgaagacctgacgaccacgttcgaa
aaggcgatcaacctgggcactttgggccgaaaaggcgtcccctgcactgctcttgttgac
gtcttcctacatcgagccgcgtttgaaagtcgagctgaaccggtcgaggatgtcgagggt
gactatcatccggtaatacaaactctgagtcgagggctcgaggcagttgtaaagtttagt
caagctggtgatccaagcttgcgcctcgagaagtttttattggactgggctgaatcacga
gctccaaaattcttgaacgaaactatctcactcctgagcaaacccagtaaaagccgacta
tcatcctaccagatgacgatactgcgatcgggcatcgaaacccgtcggggaaacattgaa
gaagctcgaaatctcttcactactgcccttcagagatcggacttggactggccagaggct
gtctacgaagccttcatacaatttgagaatgtgcatggtgacctcgataccgtactcgac
gctaacaagcggatagcgaaggctcaagagaagcttgccaaacgtagagagaaagccgca
caggagcagacggcgcagtatcaagtcgtcgcccaatccggcacgtcagccacaaccgct
gagctcttggtaccatccactgccgtggcagtcgacggccaaggactttcgacggcagct
ccggtcaccactgcgcaggcatctacttcgcaggaagcagagaatacacccctcaagcgg
caatgtggtcccatacgagagacaaccatcttatccgagcatgagcacgatcatattgca
gccttggtagagttccgagatgttgattccatccccgacgccctgactcgggatcgaaaa
aagctggcaggcaatgaggtggccgtctcaatgctatggcggtcgaccttattcattacc
aacttcccacggagcatggacgatgctggcatccgtcaactgctttcatcgtatggcctc
atcctacaaacacgatggcccagtcgtaaatacgcagattctcggcgcttctgctacgtc
acaatggattcaccagcgtcggctcagaacgccctgcagctgcatgggcaaccaacaaca
gaaggcttcaatctcaccgtcctcatttctgacccgtcagccaaggcgcgcagatcggat
acatccaagacgacattatttgtgggtggtctgacggctaagagcaccgcaccagatgtg
gagaagctcttcagtcagcgcggcgcagtgcaacacgtcaacctgggttgggatcaggct
aagcagatctgcaaaggtttcgccttcgtggagatggccaccgaggccgatgctcaggaa
gctttgaacctgcacggctctcacatcaacggccgatacctgaaagttgagatgcatgat
ccgaaccacgttaccaaaaaacggacgacaagtgcccccagagaagctatcgagagaaga
gccagaacggtccgactatctaatcttccatcggatactcaagagggtttgcttcaacaa
gccttggagaaaattgtttcggtcaaaaggctcgaactgttcagcaaggttcaccaggcg
gtggttgaactcgagtcacaagtggatgctggactacttctcttgcaatctgaaccattc
atatttggtggcgctacgatagagatccgagaagagcaacgaagaccactcccccacaag
agcgatcatacacctcccgcagcagggcaggcgacagtcgcaccctccacatcactttcg
ttcgctcctcgtgcggccagaagaggaggcaaagccatcgggaagggtagacaagcgccg
cctcaagacaaatcgctacatccctctttcgtcaaggcaagcactcactcaaacaatgaa
acggacagtggacaggtggatttccgtgcaatcgtcgctgcgaagaataagcaacggcaa
ggtaaactgctggaagcgcgacacgagcaatctgttggtggtgaatcacaaaatggagtg
aagcgatccccagaggaggcctcagaagcaccaggggcaaaaagatcaaaaaactag
DBGET
integrated database retrieval system
