Tremella mesenterica: TREMEDRAFT_69713
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Entry
TREMEDRAFT_69713 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11097
small nuclear ribonucleoprotein E
Organism
tms
Tremella mesenterica
Pathway
tms03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TREMEDRAFT_69713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_69713
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_69713
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_69713
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TREMEDRAFT_69713
Spliceosome [BR:
tms03041
]
Complex A
U1 snRNP components
Sm proteins
TREMEDRAFT_69713
U2 snRNP components
TREMEDRAFT_69713
Complex B
U1 snRNP components
TREMEDRAFT_69713
U4/U6.U5 tri-snRNP components
TREMEDRAFT_69713
Complex C
U2 snRNP components
TREMEDRAFT_69713
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TREMEDRAFT_69713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18498185
NCBI-ProteinID:
XP_007006645
JGI:
Treme1_69713
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MGGRKVAVQPINVIFSHLQKHTRITIWLYDSNEFRIEAFIVGFDEFMNLVLDEAEEVYDC
AAKPGKPVKPRRELGRILLKGDNITLIQPAQTA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtagaaaagtcgcagttcaacccatcaacgtcatattcagtcatctacaaaag
catactcggatcacaatatggctttatgacagtaatgaattccgtatagaggcatttatc
gttggcttcgacgagttcatgaatctcgtgttggatgaagcggaggaagtgtatgattgc
gctgcgaaacccggcaagcctgtgaaaccacggagggagttaggtcggatcctactgaaa
ggggataatatcacattgatccaacctgcacaaacagcttag
DBGET
integrated database retrieval system
