Tremella mesenterica: TREMEDRAFT_69766
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Entry
TREMEDRAFT_69766 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tms
Tremella mesenterica
Pathway
tms03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TREMEDRAFT_69766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_69766
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_69766
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TREMEDRAFT_69766
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TREMEDRAFT_69766
PBAF complex
TREMEDRAFT_69766
GBAF(ncBAF) complex
TREMEDRAFT_69766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7573
SANT_DAMP1_like
GATA
Motif
Other DBs
NCBI-GeneID:
18498195
NCBI-ProteinID:
XP_007006921
JGI:
Treme1_69766
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSTPKLSLRVSTPGKADEATGDVMTHDVSSAPGKDREKEPLYGGELANISQGVGMVVDPP
AGESSSAPQQEDITVETPAEEPERPSARDLHALATTYLASQTHPLIIPSYASWFSLSSIH
PIERRSLPEFFSSRNRSKTPAVYKDYRDFMINTYRLNPGEYLTVTACRRNLAGDVGAIMR
VHGFLEQWGLINYQVDPDTRPAALGPPFTGHFRVTLDTPRGLSNLLHGGTKPLPLNQQSS
QSHSQTNGLSHVNLDLKKTIYQSSSRPFKPISSSEAAVIAAKPSSPNKPTSFACDTCGTD
CTRSRYRSLKDGEYTLCPSCFVSGRFPSTMFSGDFVRLDDELFKHTTTGAGSEWSDQETL
LLLEGVEMYDDDWQAVAEHVRTRSKEQCIAYFLQMPIEDPYLAQDGAQLGPLRYQAGMGA
LPFEGTENPVMSVVTFLAGAVGPGIAAAAAQSALGELSQNLKRKRAAEDVTSDSRPEKTK
SPVGEGIKEEGMVVDGEESQPKPTEPTDEMEAEGEKEEAAGDAPSKSAVERAAAIALGSA
AAKASALVQHEENRIASLVSRLVAAQVKKVELKLSMVERLESVLEDERRSVEQARQGVFK
EKVVLEKRLAEVEEILRKAKEGEMGKTTAGQVEEVTNGTKPDGGEVIRL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaccgaaactctctttacgcgtttcaacacctggaaaagcggacgaagctacg
ggggatgtgatgactcacgatgtatcttctgcgccggggaaagatagggaaaaagaacct
ttgtatggtggagagctggcgaatatctctcaaggagtgggtatggtggtggatccccct
gcaggagaatcatcttcagccccccagcaagaagacatcacggtagaaacaccagccgaa
gaacctgaacgaccttcagctcgtgatcttcacgcgttagctacgacctatcttgcctct
caaactcatcccctcattatcccttcctacgcatcatggttttctctctcttccattcac
ccgatagaacgtcgatcgttacctgaatttttcagtagtagaaatcgttcaaaaacccca
gcggtctacaaagattatcgtgatttcatgatcaacacatatcgtttaaaccctggtgaa
tacctcaccgtcactgcttgtcgtcgaaatttggctggagatgtgggtgccatcatgcga
gttcatggtttcctcgaacaatggggtttgataaattatcaagttgatcctgatactcgt
cctgctgctcttggtcctcctttcactggacatttccgtgttacactcgatacacctcgt
ggattgagtaatcttttacatggaggtaccaaacctcttcccttgaaccaacaatcaagt
caatctcattctcaaacaaatggtttatctcatgttaatctcgatctgaagaaaacaatt
tatcaatcctcttcccgtcctttcaaacctatatcttcttctgaagcggctgtcatagct
gcaaaaccttcatcacccaataaaccaacttcgttcgcttgcgacacttgtggtaccgat
tgcactagatctcgatatcgttctctcaaagatggtgaatacaccttatgtccttcatgt
ttcgtctctggtagattcccatccaccatgttctctggtgattttgttcgactagatgac
gagcttttcaaacataccacaactggtgcaggatccgaatggtcagatcaagaaacattg
ttgttactcgaaggtgtggagatgtacgatgatgattggcaagctgttgcagaacacgtc
aggacgagatcgaaagaacagtgcatagcgtatttcctacaaatgcctattgaagatcct
tatttggctcaagacggcgctcaattgggtccattacggtatcaagcagggatgggagcg
ttaccttttgaaggtactgaaaacccagtgatgagtgtcgtgactttcttagctggagct
gttggacctgggatagcagccgcagctgctcaaagtgctcttggtgaattatcacaaaat
ctcaaacgtaaacgagctgcagaagacgtcacttcggattctagacctgaaaaaacgaaa
tcaccagtgggagaaggaatcaaggaagaaggtatggtggtggatggagaagaatctcaa
cctaaacccactgaacctaccgacgaaatggaagccgagggagaaaaggaagaggctgcg
ggtgacgctccttctaaatcagcggtggaaagagcggcggccatcgcacttggatcagca
gctgctaaagcttccgctctggttcaacatgaagaaaaccggatcgcttctttagtctcg
cgtttggtcgctgctcaggtgaagaaggtagaattgaaattgagtatggtagagcgtctt
gagagtgtcttggaggatgagagaaggtctgtggaacaagctcgacagggtgttttcaaa
gaaaaagtggttttagaaaaacgattagcagaagttgaagagattttgaggaaagctaaa
gagggtgaaatgggtaaaactacggctggtcaagtggaagaggttacgaatgggacgaaa
ccggatggaggagaggtgatcaggttgtaa
DBGET
integrated database retrieval system
