Tremella mesenterica: TREMEDRAFT_69817
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Entry
TREMEDRAFT_69817 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
tms
Tremella mesenterica
Pathway
tms03430
Mismatch repair
tms03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TREMEDRAFT_69817
03460 Fanconi anemia pathway
TREMEDRAFT_69817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_69817
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
TREMEDRAFT_69817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18498204
NCBI-ProteinID:
XP_007006937
JGI:
Treme1_69817
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MSDGEEHEPKGPRPIKKLSKDVINQIAAAEIIHRPANAIKELLENSLDAGSTSIKITVKE
GGLKLLQIADNGHGINKSDLPLLCTRYATSKLSKFSDLERLQTYGFRGEALASVSYCSHV
EVVTKTRDDGCGWKAHYQDGVLVPSKPGLTPDPRPTAANDGTVISAEDLFYNNALRKRAF
KSPSEEYNRILDVITKYAVHNPHCAWVCKKAGTALPDISTPAASTSRANISLLYGATLAN
ELLELPKTTLDPIERLGARCEGLVSNANSNWARKGGWLLFINHRLVDSSRIKKAVDSLYT
AFLPKGASPWVYLSLEIDPSKVDVNVSPTKSEVHFLNEDEMIEAIVAVVQTALAGANVSR
SFTVQTLLPGAPEPPSRPRETEAGPSKARKPAPNYKVRVDSSHRTLDSMITISDPSQLGR
YTEIVSLDTGERPHKRRVMEENGTGEHPLEVESDEEGQLGVGERESSWDAPREKGRGEVI
PESGCELESVQELRRGIRKKGSAEVTEMLSKHAFVGIVDRQMCLSLFQHSTKLYLVNHVT
LADEHFYQLSLRQFGAFNRLRLDPPPDLGDLLRLAVSDEPGILAAGLDSDVVVDKICRLL
LERREMIDEYFSLRISEDGEVETLPMILKGYTPNLDRLPHFLLCLGTRVNWEIENECFHT
FLQELSFFYSPRPFSNHYQSPSGSKEENGMINAEEITHQDWQLEHVLYPSFRRYTHWSRD
ILKDLKQVANLPDLFRVFERC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggggaagaacacgaacccaaaggaccgagacctatcaaaaagttatccaag
gacgtcatcaaccaaatcgctgctgcagagatcatccatcgtcctgcaaacgccatcaaa
gaactgctcgagaattccctcgacgcaggctcaacttctatcaaaatcacagtcaaagaa
ggtggactcaaattgctccagatagctgataatggtcacggtataaacaaatccgactta
cctctactctgtacccgttatgcgacgtcaaaattgtcaaaattctcagatttggagaga
ctgcaaacgtatgggtttagaggagaggctttggctagtgtgagctattgcagtcatgtg
gaggtggttaccaagacgagagatgacgggtgcgggtggaaagcacattaccaagatgga
gtcctcgtgccctccaaaccaggtctgacacctgatcccagacctacagcagcgaacgat
gggacggtcatctccgcggaagatttgttctacaacaatgcattgagaaaacgagctttc
aaatccccttcggaggaatataatcggattctcgatgtgatcacaaaatatgcggtacat
aatcctcattgtgcctgggtgtgtaagaaggcgggaacagctttacctgatatttccaca
cccgccgcatctacctcacgagccaatatttctttactttacggtgcgactctagccaac
gaactgcttgaactgcccaaaactacacttgatcctatcgaaagactaggagcgaggtgt
gagggtttggtgagtaatgcgaattctaattgggccagaaaaggtggatggttgttgttt
ataaaccaccgattggtagattccagcaggatcaaaaaagccgtagattctctctacacc
gcttttctacccaaaggcgcctctccatgggtatatctcagccttgaaattgatccctcg
aaggtggacgtgaatgtttcacctacgaaatccgaggtccacttcttgaatgaagatgag
atgattgaagccatcgtggctgtggtgcaaaccgctttggctggggccaacgtctcgaga
tcttttacagttcagacccttctcccaggcgctcccgagccaccctcccgaccccgcgaa
accgaagcgggtccgtccaaagcgcgcaaacctgcgccaaactacaaagttcgcgtcgac
tcctctcacaggactctcgactcgatgatcaccatctccgacccgtctcaactcgggaga
tacactgagattgtgtcattggacacaggagagagaccacacaagcgtcgagtcatggaa
gagaacggcaccggagagcatcctctagaggttgagagtgacgaagagggtcaattaggg
gtgggtgagagggagagttcatgggatgcgccaagggagaaaggtagaggggaggtgata
ccggaaagtggatgtgagcttgagagtgttcaggaattgaggagaggtataaggaagaag
ggtagcgcggaagtcacagagatgttgtccaaacatgcttttgtagggatagtcgataga
caaatgtgtttatccttgtttcaacatagcactaaattataccttgtcaatcatgtcact
ttagcggacgaacacttttaccaactatcattgcgtcaattcggcgctttcaatcgttta
cgtcttgatcctcctccagatctgggtgatttactccgtttggccgtttctgacgagcct
gggatcttggctgcgggactggattcggatgtggtggtggataaaatatgcagattactc
ttggaaagaagagagatgattgacgaatatttttctttacggatttctgaagatggagag
gttgaaactttacctatgatactcaaagggtatacaccgaatttagataggttacctcat
ttcttattatgtcttggaactcgggtcaattgggagatagaaaacgaatgttttcacacg
ttcctacaagaattatcctttttctattcccctagacctttctccaaccattatcaatct
ccatcaggatcgaaagaagagaacggaatgatcaacgcagaagaaataacacatcaagat
tggcaactcgaacatgttttgtatccatctttcagaagatacactcattggtctagagat
atattaaaggatctaaagcaggtagctaatttacctgatttgttcagagtgtttgagagg
tgttga
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