Tremella mesenterica: TREMEDRAFT_70187
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Entry
TREMEDRAFT_70187 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K20168
TBC1 domain family member 15
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_70187
Membrane trafficking [BR:
tms04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
TREMEDRAFT_70187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
18498266
NCBI-ProteinID:
XP_007007846
JGI:
Treme1_70187
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MKFLSAFDTTIPPSRTMTGTPAEARLLYCKSHVSIHPTSHRNDDISGYLAIVQTDSPVSA
PLPESTGSLKPPNGAILISWVPNELLEQMNEQDRESYKRSRGAELWLVNPTKSDREVHEH
AVEDPVPPRSTSKSSHTTSPPDVQQAPYPPKPFFPNSSVLSQNTPKQTLLTGLSTLTNLS
RKTAQQLLSHPLAQPMVPHLPPIVQNFVNASGEWERSGRSTTKTAGGGDVANEFEAARLY
LARWARVVAEEGERARRNEVTRHADLAQSVRVGSEDLASSLGVFSLLTSPNSKRPIPHPT
RMPHQPITAKEWDLFAAQGRDELWVRREIFRRGLPSASEVGNEHVRREGWEVLLGVVPWS
VGGLGGGEAGQPKRRQERHELLEKKRTEYAVLKKRWQEEADARRTDSWKDEWHRIDVDCR
RTDRQQAIYAVPGSAVVQGEGDPGTGDPRLFWEDDAEETAGDQAGQATLNPHIAALRTIL
MTYHTYRPELGYVQGMSDLLSPTYVVFGANEADAFWGLVGIMQMLESNFLRDQSGMKHKL
STLQQLIRVMDPELYTHLERTDSLNLFFCFRWILIAFKREFSFDVVIKLWDILWTNYYSN
DFVLFVALAILQSHRDVIIRYLTEFDEVLKYANDLSGTIDLDTTLAQAEVLFLAFRGLVE
DTDHDNALDELGESTLRRRRLSAGQCLVGWKDTGSGLSGEMSPQMVSPGVTSHQATTREG
VSENVRGLSISSVPIGYA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctcagcgcgttcgataccaccatcccaccaagtcggaccatgaccggcact
ccggcggaggcaagactcttgtactgcaaatcccatgtatcgatccatcctacctcacac
cgcaacgatgacatatctggatacttggccattgtacaaactgactcccccgtctccgcc
ccgctcccagagtccaccggctccctaaagccgcccaatggggctatactaatttcctgg
gtcccgaatgaactgttggagcaaatgaatgaacaagatcgggagagctacaagcgatcg
cgtggagccgagctttggcttgtaaatccgacgaaatcggatcgagaagtacacgaacac
gcagtagaggatccagtacccccgcggtcgacaagcaagtcttcgcacacaacgtcaccg
cctgacgtgcagcaggcgccttaccctcccaaaccgttctttcccaactcgtccgttctt
agccagaatactcccaaacagacccttctgaccggcctgtccaccttgaccaacctgtct
cgaaaaacggctcagcagcttctatcccaccctcttgctcaacccatggtacctcatctg
ccacctatagtgcaaaattttgtcaacgcctcgggagaatgggaacgctctggtcgaagc
actacgaagacggcagggggcggcgacgtggcgaatgagtttgaggccgctcgactatac
ctcgctcgttgggcccgcgttgtggccgaggagggggagcgtgccaggcggaatgaagtg
acacgccacgcagaccttgctcaaagtgttcgagtggggtcagaggatcttgccagttcg
ttgggtgtcttctctctcttgaccagtcccaactccaagcgccccataccccatcctact
cgcatgccacatcaacctattacggccaaggaatgggatctctttgctgcacaaggccga
gacgagctgtgggtgagacgagagattttcaggcgaggtcttccaagtgcctctgaagtc
ggcaacgagcacgtgaggagggaaggctgggaagttttactcggcgttgtgccctggtct
gtaggcgggcttggaggaggagaggccggtcaaccaaaaagacggcaagagcgacacgaa
cttttggagaaaaagaggaccgagtacgccgtactaaaaaagcggtggcaggaagaggca
gatgcgcggagaaccgactcgtggaaagacgagtggcatcggatagacgtcgattgccga
aggactgacaggcaacaggcaatctacgcggttcccggatcggcggtcgtccagggggag
ggggatcctggtacaggagatcctcgcctcttctgggaagacgacgctgaggaaacagct
ggtgaccaggcgggtcaagccacgctcaatccccatatcgcggcactgagaacgattttg
atgacgtatcatacctatcgtcctgagctgggctacgtacaaggcatgtcagacttgctg
agtcccacttacgtcgtatttggagcaaatgaagccgatgccttctgggggttagtgggg
atcatgcagatgctggagagcaactttcttcgtgatcagagtgggatgaagcacaagctt
agcactttgcagcagctcatcagagtgatggacccggaattgtatacccatttggaacgg
accgactctctcaatctcttcttctgcttccgatggatacttatcgctttcaaaagggag
ttctcattcgacgtggtgatcaagctttgggatatcttatggacgaattattactcgaat
gactttgttcttttcgtcgcattggcgatcctgcagagtcaccgggatgtcatcatccgg
tacttgacagaatttgatgaagtgttgaaatatgcgaatgacctcagcggtacaatcgat
cttgatacaacccttgcccaagctgaagtgctctttctcgcttttcggggtttggtcgag
gatacggatcatgacaacgcattggatgaattgggtgaatcaaccctacggcgtcgccga
ttgagcgcagggcaatgtcttgttgggtggaaggacacgggatcggggctatccggtgag
atgagtccgcaaatggtatcgccaggggtcacttcgcatcaagcgacgaccagagagggt
gtttctgaaaacgtccgtgggctctccatcagttcggtccccataggttacgcctga
DBGET
integrated database retrieval system
