Tremella mesenterica: TREMEDRAFT_70200
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Entry
TREMEDRAFT_70200 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14304
nuclear pore complex protein Nup85
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_70200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_70200
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_70200
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TREMEDRAFT_70200
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TREMEDRAFT_70200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
18498268
NCBI-ProteinID:
XP_007007851
JGI:
Treme1_70200
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MTGALDADDNVETYYLKPPTFSKKTKKEWKKSGRGMMAAVSPTGGEVAIWVTKKTGDDPN
KPLSLSDPRITMPDRTVYFASHTSIPNPVVTLYTESYTLFTSLQRIVASSIRLPSIGVGA
EAWDKKGNLIGIEGLMGPPAAETIGHMRRLGMMYVEELAKVREAEGLEIAVKSHFSAVFY
VLQLAVILYLPPDGRGEGLLGEELLDWVNDVDPAPDNIQGQEIMQVKEPWSHPSFWPYII
RCILRGFHLPASSFLRTLSSHRHPPISKLGMLLSTHLSLFPRSHNTAAYPLDHQFLTAHR
KWVGRFKAELAAFIGGRPKGQWLEETLPGGSVGETGKWSSNERDFRTVIELMEGKPDRVL
EESADWREAVGAWGILVDVGLRRDDLPEVTDRILAKIPADSTVLDDNIQASLCSGDIVKA
LTSCHELDVWLAAHLSDIFDKLVMIPDDEERFDMSLRDYFLLEYTDLLQNNPKHLAFWRI
IADYLSAAGDEGRCRLREFILHVSLDSDITPSQKPDSVSSIAPANQMDGMQVEEVDPVEE
HLRKFAEIKEACVELKLEEEWRIISGILADRLMRKKEFGLAATMCLQAEDGGSLSRIAEI
ILDTYITDGEEEFLRLVDTLPPSLLNDAPLALKGLDDDYELNGGGLAVSVFASRLMFLAE
FRDYLLFFGQGVRDQAASRLVGLLTSGIAPIRFWAVLLVEAIPLLEDSEILFTSNDTFEL
LRVLEEITSNSTYAPTEYLAQLGQLLLRLSSEIKLSGKMTTEMNGSLDNSKGMIKKTQGS
EDGISLAIRKLEEARLALARNLARALVVGFDAPF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtgcattagatgcggatgacaacgtggaaacttactatctcaaacctccaacg
ttctctaagaagaccaaaaaagaatggaagaagtcaggaagaggaatgatggctgctgtt
tccccaactgggggagaggttgccatatgggtcaccaaaaagaccggagatgatccgaat
aaacccctttcattgtctgatcctaggataacaatgccggaccgaacggtgtacttcgca
tcacacacctcaattcccaatccagtcgtcaccctttatacagagtcatatactctcttc
acttctctacaaagaatcgtagcctcttccatacgactaccgtcgataggcgtaggagcc
gaggcatgggataagaagggtaatctgatagggatcgaaggtctcatgggacctccggca
gcggaaactattggacatatgagaagattgggaatgatgtatgtggaagagctcgcaaag
gtccgtgaggcggaggggctggaaatagcagtaaagagccatttcagcgcggtattttac
gtcctacaactggccgtgatcctgtatttaccacctgatggaagaggggaaggtttgtta
ggagaagagctgttggactgggtgaatgatgtggatcctgcacccgacaacatccaagga
caggagatcatgcaggtgaaagaaccctggtctcatccctcattctggccatatatcatt
cggtgtatcctgcgaggctttcatctccctgcatcctcatttctacgtactttatcatct
caccgtcatccgcctatatcgaaactcggcatgttactctcaacccatctctctcttttc
ccacgctcacataacaccgccgcatacccattagatcatcagttcctcaccgctcatcgg
aaatgggtcggtcggttcaaggccgagctggcagcgttcatcgggggaagaccaaagggt
caatggttagaagaaacattgccgggagggtcagtgggtgaaacgggcaagtggtcgtct
aacgagagagattttagaaccgtgatagaattgatggagggaaagccggaccgagtgctg
gaagaaagtgccgattggcgagaagccgttggtgcatggggtatcttagtggacgtgggc
ttaagaagagatgatctgcccgaggtcaccgataggatattagcaaaaataccggcagac
tcgacagtgttggatgataatattcaagccagtctctgttcaggagatatcgtcaaggcc
ctcacttcatgtcacgagctcgacgtatggcttgcagcgcatttgagcgatatctttgac
aagctggtcatgatacctgatgatgaagaacggtttgatatgtctttacgagattacttc
cttctagaatataccgacctcctgcaaaataatcccaaacatctcgctttctggcgtatc
atcgccgactatctttctgctgctggcgatgaaggacgatgtcgattacgagagttcatc
ctgcatgtcagcttagacagtgacatcacaccttctcaaaagcctgactcggtttcatct
atcgctcctgctaatcagatggatggaatgcaagtagaagaggtggatccggtggaagag
cacttacgcaaattcgccgaaatcaaagaagcttgcgtcgagctcaaattggaggaagag
tggcggataatcagcggcattttggctgatcggttgatgaggaagaaagaatttgggttg
gccgctacaatgtgtttgcaagctgaagacgggggttctttgtccagaatagcagagata
atattggatacatatatcaccgatggggaagaagaattcctgagattagtcgacactctt
cccccttcactccttaatgacgcacccctcgctttgaaaggtttggacgacgactacgaa
ctgaatggtggtggattggccgtctccgtcttcgcatcccgtctgatgttcttggccgag
ttcagggactatttgcttttctttggacaaggggtgcgggatcaagcggcttcacgatta
gtgggattgttgacttctggtatcgcgccaatacgtttttgggccgttttgctcgtagaa
gctattccattgttggaagactcggagatactattcacttcgaatgacacattcgagctt
ttgcgtgtactggaagaaatcacttccaattcgacatatgcgccaaccgagtacttggcc
caactgggtcagctcctactccgtctttccagtgagatcaagttatctgggaaaatgacc
acggaaatgaacggtagtttggacaattcgaaaggaatgataaagaagacacagggttcg
gaggatgggatttcattagccattaggaaattggaggaagctcgtttagctttggctcgt
aatttagccagggctttggtagtggggtttgatgcccctttttag
DBGET
integrated database retrieval system