Tremella mesenterica: TREMEDRAFT_70321
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Entry
TREMEDRAFT_70321 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_70321
Enzymes [BR:
tms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TREMEDRAFT_70321
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TREMEDRAFT_70321
Prokaryotic type
TREMEDRAFT_70321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
18498289
NCBI-ProteinID:
XP_007008092
JGI:
Treme1_70321
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MEKDYRPNWVVRCLSVPGPDTSLSLYIAFDNARWLFGCGEGTQRAFIQKGLVMRSLTGII
MPSGGSKDRNGLPGLIMTAADAGIRNLDIIGPPDVGHHLASFRASLQRISINVKTHHPST
ASSELRQIYDHPSINIKAFSILPSSQSDSNDQSSPIPTPPPFIPITSTVTNPVPHLHPPT
QPWALPPDQKNTWIEHIMDDMFSRHFAKPSPDTPGPIRPNSADARYPLGLLDDSVQRCDM
IYVFQAPDFPGKFDVASAERLGVYGKARGLLVKGQTVEVKDPSQPGGMRIVRPEECLSGG
GTGAVMVIVQCTEKTVSSLLGSSQLNDYKHPGGGKTVALMVHHTSKDIWMREDYQRWVQS
FGTEPKVTDTTPSPNEIFFTSAAWNHLHLSQIDSTIFHFPNSLPQTTPPISLPSNTVLLQ
SGHSIRMHPPGSLELLPRPSKDIPFPLPYLSSISDIPSPSSEYLNACLKAQETVKHLSLP
IPPKTSATETTPLQSVNPILPLQDVGMKDQHDKVTYEAEPKVGDDIIITTLGTGSALPSK
YRNVSSTLVEIPGTGGVLLDCGEGTLGQLRRRFGDLSELWKDLKMIFISHLHADHHLGLQ
SILEDRFKHNIHTPLYIIAPIQIALSLQESYKWQLDVPREALRNLVFLPSNRIQGMISRD
SLSLVKRVDGGSGSSVGVGKDGSEGLGRGWPFGLLYSPELASEQTLQTNLRALFDALSLE
EIQIPLVEHRGRAWGLVLKHQTGWKVVYSGDTMPSENLIQAGKGATVLIHEATLEDDKPD
VAKEKGHSTFSQAVGVGRKMGASHILLNHFSQRYPKLPRLAPSSTFYPSYPTIDQTDQTI
PSTSEAVASKGTDPSHTISSPLQPDPEPIISISFDLMSIRVGDMWKMSHYMEAMSLLFAS
EPEESEGMVEGDVNSVGTRQKKRGSGEALLDEVVSAKEDAVGTESGGGAGKGSTTVRKEG
QKTDMHDGKKKRRAEKAKRAGKGLSGGDGMISGSGVGTMEGNVLGEKPEVGGQEVV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagattatcgacctaattgggttgtacgttgtctttccgtacctggaccagat
acctcattatctctttatatagcatttgacaatgctcgatggctgtttggatgtggggaa
ggtactcagagggcgtttatacagaaaggcttggtgatgagaagtttgacggggatcatc
atgcccagtggtggaagtaaagatcggaatgggcttcctggactgattatgactgctgcc
gatgcggggataaggaatctcgatattatcggtcctccagatgtgggacatcatcttgcc
tcttttcgagcttcattacagcgaatctcaatcaatgtcaaaactcatcatccttccact
gcctcttctgaattgagacaaatatacgaccatccaagcatcaatatcaaagctttctct
atcttaccttcatcgcaatctgactcgaatgatcaatcatcccctatccccacacctcct
ccttttatacccatcacttccacagtaacgaatcccgtgccccacctgcatccaccaaca
caaccatgggctctcccacctgaccaaaagaacacctggatagaacatatcatggacgac
atgttctctcgtcattttgccaaacccagtcccgatacgccaggtccgatacgaccaaac
tctgccgatgctagatatcctctaggattgctagacgactcagttcagagatgcgatatg
atctacgtctttcaagctcctgattttcctgggaaatttgacgttgcttctgctgagcga
ttaggggtgtatggaaaagcgagggggttgttggtaaaaggacagactgtggaggtgaag
gatcctagtcaaccgggtggaatgagaattgtgagacctgaggaatgtttgagtggagga
ggcacaggggcagtaatggtgattgtacaatgtacagagaagacagtatcttctttgttg
ggatcgtctcaattgaacgattacaaacatcctggaggaggcaagacggtcgctttgatg
gtgcatcatacatccaaggatatttggatgagggaagactatcaaagatgggtacaatct
tttggtaccgagccaaaagtgactgacactacaccctctcccaacgaaatcttctttact
tcggcagcatggaatcatctccatctctcacaaatcgattctacgatatttcactttcca
aattcacttcctcaaactacaccgcctatctctttaccttcaaataccgtcctcttacaa
tctggtcatagtattcgaatgcatcctcctggatcactcgaacttctccctcgaccatcc
aaagatatccctttcccactaccttatctctcatcgatatctgatatcccttccccttca
tctgaatatctcaacgcttgtttgaaagctcaagaaacggtcaaacacttatcacttccc
ataccacctaaaacatcagccactgaaacgacacccttgcaatctgtcaatcccatcctc
cctctacaagacgtgggtatgaaagaccagcatgacaaagtcacatatgaagcagaaccg
aaagtaggggacgacataatcatcacaaccctcggaacagggtcagctcttccaagtaaa
tacagaaacgtttcttctactcttgtagagataccagggactggtggagtattgttagat
tgtggagaaggtactttaggtcaattaagaagaaggtttggtgatttgtcagagctctgg
aaagatttgaaaatgattttcatcagtcatttgcacgctgatcatcatttgggcttacaa
tcgattttggaggataggttcaagcataacatacataccccactatacatcatagctcca
atacaaatagcattatcattacaagaaagttataaatggcaattggacgttcctcgggaa
gcattgagaaatttggtgtttttaccttccaacagaatacagggtatgatatcccgggat
tcgttgtctttggtcaagagggttgatggtggatctgggtcgtctgtgggggtggggaaa
gatgggtcggagggtttgggaaggggttggccgttcggtttgttgtatagtcctgaactt
gcttctgaacaaactctccaaactaacctccgagctttgttcgacgcgttatctctcgaa
gaaatacaaatacctttggtagaacatcgtggcagggcttggggtctagtgctgaaacat
caaacagggtggaaagtagtatactcgggagatacaatgccttctgagaatttgatacaa
gccggaaaaggagcaactgttttaattcatgaagctactttggaagatgacaaacctgat
gttgcaaaggaaaaaggacattctactttttctcaagctgtgggtgttggtagaaaaatg
ggagcttcacacatccttctgaaccacttctcacaacggtatccaaaacttcctcgactt
gccccttcctccactttctacccttcgtacccaacaatcgaccaaaccgaccaaactatt
ccttccacctcagaagccgtcgcatcaaaagggacggatccaagtcacactatatcatct
ccacttcaacccgatccagaacccatcatctccatctcattcgacttgatgtctatccgc
gtaggggacatgtggaaaatgtcccattatatggaggccatgtcccttttgttcgcctcc
gagccggaagaaagtgaggggatggtagagggggatgtgaatagtgtaggtacgaggcaa
aagaagagaggatcgggtgaagctttacttgatgaagtggtttcggccaaagaggacgct
gtgggaactgaaagtgggggaggagcagggaaggggtcgacgacagttaggaaagagggc
cagaagactgatatgcatgacgggaagaagaagagacgggcggagaaggcgaaacgagct
gggaaaggtttgtctggaggagatggtatgatcagtggaagtggggtaggtacgatggag
gggaatgttttgggtgagaagcctgaagtgggcgggcaggaggttgtctga
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integrated database retrieval system
