Tremella mesenterica: TREMEDRAFT_70420
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Entry
TREMEDRAFT_70420 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_70420
Membrane trafficking [BR:
tms04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
TREMEDRAFT_70420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ysc84
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
18498311
NCBI-ProteinID:
XP_007008320
JGI:
Treme1_70420
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MGINSPLPVRLPEETKKAAKILRSFVDGQNNGLDKVIPHTVLEKAEGFAIFTVVKAGFLF
SARAGSGVVIARTQDGSWSPPSAIGLGGVGFGGQAGAEVTDFVIVLNSKSAVTSFMSAGS
LTLGGNLSIAVGPLGRNAEGSGTVSAKGKIAAMYSYSKTKGLFGGVSVEGSVIVERQDAN
RLAYGGSPSAKQILSGAFDPPDWAQCLIEELQRATGAISGQQWRDMDHEGEGGGMSVIPP
GIGNRSRSGSNTGSGYVFGEGIGAMGTGKTRSRSGSLLSNHSERERNPARIRANDYMPRR
GSVLNPFSNGSPKKNVVSSSSEQYNAGLTWDSDGPMVPVTRPRGLSSLRNSDRPDDQINV
FKDISTSTSKMTSPTFPSNHFNVKTNVNTNVNGSNPKNNPNLGELTSNIGSTPMKGYRNG
FSSTESNGDLIGTGSENSEGEKDLLGHWDSNGDGLTTSFDKLSMGLGQRSRSNSRPPLQD
LQEDTTDLLGSPNRGKPRMEKERGLSNRGSPSRLTKKVSGRMKEYQETSIEHDPFSLRGI
DRNPGITGEWDKDKDGFSSSSPEREGQYDMRNKVLGKDWEMKQDRLFTDLPKNEVGGEDG
FARAIALYEFVPTDPGDLGLKQGQKIMVLDKVGQGEWWRGKDDRGKEGIFPVNYVEVVFL
PKDLKGGVWRSELRARMADSIFA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaacagtcctttacctgtccgactacctgaagaaaccaagaaagcagcaaag
atcctccgttcattcgtcgatgggcaaaacaatggattggacaaagtcatacctcatacc
gtacttgaaaaagcggaaggttttgcgattttcactgttgtcaaagctgggtttcttttc
agtgctagggcggggagtggggtagttattgctcgtacacaagatggatcatggagtcct
cctagcgctatcggtcttggtggtgtaggttttggtgggcaagcaggagcagaagtgacg
gattttgtcatagtgctcaattccaagtcggcagtgacgagtttcatgtctgctgggagt
ctcacgctagggggcaatctctctatcgccgtaggtcctcttggacgtaatgccgaaggt
tccggtaccgtcagtgccaaaggtaaaatcgcagccatgtattcatattccaagaccaaa
ggtttattcggtggtgtttccgtcgaaggatccgtcattgttgaaagacaagatgccaat
cgtttagcttatggtggttcacccagtgcaaaacaaatcctttctggagctttcgatcca
cccgattgggcacaatgtctgatagaagaattacaacgtgccacaggtgcaatttcaggt
caacaatggcgtgatatggatcatgaaggtgaaggaggtggaatgagtgttatacctcct
ggaattggaaatagaagtagatctggttcaaatactggatcaggttatgtattcggagaa
ggaataggagctatgggtactggtaaaaccagaagtcgatcaggaagtttattatcgaat
cattctgaaagagaaaggaatccagctaggattagagcaaatgattatatgcctagaaga
ggaagtgttttaaatcctttttcgaacggttcaccaaagaaaaatgtcgtatcgtcaagt
agcgaacaatataatgctggtttaacatgggattcggatggtcctatggtacctgttaca
agacctaggggattatcgagtttgagaaatagtgatagacccgatgatcaaatcaacgtg
tttaaagatatatcaacatcgacatcaaaaatgacttctccaacttttccttcaaatcat
ttcaacgtcaaaaccaacgttaacaccaacgttaacggctctaatcccaaaaacaatcca
aatctcggggaactcacaagtaatatcggatcaactccaatgaaaggatataggaatgga
ttcagttcaacggaatccaatggagatctaatcggaaccggaagtgagaattccgaagga
gagaaagatttattaggtcattgggattcaaacggtgatggtttaacaacttcattcgat
aaattatcaatgggtcttggtcaaagaagtagaagtaattcacgtccacctttacaagat
ttacaagaagatactacggatttgttaggttctccaaatagaggcaaacctcgtatggaa
aaagaaaggggtttgtcgaatcgaggttcacctagtagattaactaaaaaagtttcggga
agaatgaaagaatatcaagaaacttccatagaacatgatcctttttcactcagagggatc
gatagaaatccaggaataacaggagaatgggataaagataaagatggtttttcttcttct
tcaccagaaagagaaggacaatacgatatgagaaataaagtcttgggaaaggattgggaa
atgaaacaagatcgattgttcacagatttaccgaaaaatgaagtaggtggtgaagatggt
tttgctagagctatagcattatacgaattcgttcctaccgatccgggagatttagggttg
aaacaaggtcagaaaatcatggttttggataaagtcggtcaaggtgaatggtggagaggt
aaagatgatagaggtaaagaaggtattttccctgttaattatgttgaagtcgtttttctt
ccaaaggatttaaaaggtggagtgtggaggagtgagttgagggctaggatggcggattct
atctttgcttaa
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