KEGG   Tremella mesenterica: TREMEDRAFT_70503
Entry
TREMEDRAFT_70503  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_70503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_70503
Spliceosome [BR:tms03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    TREMEDRAFT_70503
 Complex C
   U5 SnRNP specific factors
    TREMEDRAFT_70503
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd TibC_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st PQQ
Other DBs
NCBI-GeneID: 18498324
NCBI-ProteinID: XP_007008469
JGI: Treme1_70503
LinkDB
Position
Unknown
AA seq 375 aa
MSVRKSPPPGPGTALTKRARVEDDDEMDGRNMTMTVASSGEGQMKNALVRSVKRTSGLEA
PIVSLSGAHGGEITACKFDPSGKTLAACSVDRSISLWRTYPPHDNYGILPNVHKMAILDM
AYSLDSEVIYSGGADGMLIATDLRTGDRLLRYPAHYGPLNSLSVTISGGRELILTGGDDG
IARVWDPSLEGKDPVAEFDDGRDCPVTAVEWSGDGNQSFVGGVDNEIKVWDLRTNKVLYT
LRGHTDTITSLSLSPNTHYLASYALDSTLIIYDVRPFSADPMRVYRSLTGAPAGFESALI
RCAWSKHDNGARIAAGGGDRSVTVWDVETGRILYKLPGHRGTVTAVDLHPREPIILTGSK
DTNMLLGELDAQDYA
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgtcagtcaggaaatcccctcctccaggtccagggacggcactcaccaaacgggccagg
gttgaagatgacgatgaaatggacgggaggaatatgaccatgacggtagcttcttccggt
gaaggtcagatgaagaacgctttggttaggagtgtgaagaggacaagtggattggaagct
cccatagtcagtttgagtggggctcatgggggggagataacagcatgtaaattcgatcca
tcaggaaagaccctagctgcttgttcagtggatcggagtatatcattatggagaacatat
ccaccgcatgataattacggaatactaccgaatgttcacaagatggccattttagatatg
gcttattcgttagattcagaggtcatatattctggcggagcagacggcatgttgatagct
accgacctccgaacaggcgaccgacttctacgttatccagcacactacggacctctcaat
tctctctccgtcaccatatccggtggtagggaattaatcctgactggaggagacgacggt
atagctcgtgtttgggatccgagcttggaagggaaagatccggtggcagagtttgatgat
ggaagggattgtcccgtcacggctgtggaatggagtggggatgggaatcaatcttttgtc
ggaggggtggataatgagatcaaggtctgggacctgcgaacgaataaagttttgtatacc
ctgaggggtcatacggataccatcacatccctatccctctccccaaatacccactaccta
gcttcttacgccctcgactccacattgataatctacgacgtccgacccttctccgccgac
cctatgcgggtgtacagatccctcaccggtgctcctgcagggttcgagagtgctcttata
cgatgtgcttggtcgaaacatgataacggtgctaggatcgccgctgggggaggggatagg
agtgtaacggtttgggatgttgagactgggagaattttatacaagttaccaggacatagg
gggacggtaacggcagtggatttacatcctagagaaccgatcatcctgacaggatcaaaa
gacaccaacatgcttctaggtgaactcgatgcgcaagattacgcttaa

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