KEGG   Tremella mesenterica: TREMEDRAFT_70674
Entry
TREMEDRAFT_70674  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
tms  Tremella mesenterica
Pathway
tms03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TREMEDRAFT_70674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tms03021]
    TREMEDRAFT_70674
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_70674
Transcription machinery [BR:tms03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     TREMEDRAFT_70674
   Coactivators
    SAGA/TFTC/STAGA complex
     TREMEDRAFT_70674
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     TREMEDRAFT_70674
    STAGA complex
     TREMEDRAFT_70674
    TFTC complex
     TREMEDRAFT_70674
    SAGA complex
     TREMEDRAFT_70674
    SLIK complex
     TREMEDRAFT_70674
SSDB
Motif
Pfam: TAF6_C TAF Histone CBFD_NFYB_HMF Bromo_TP
Other DBs
NCBI-GeneID: 18498363
NCBI-ProteinID: XP_007002011
JGI: Treme1_70674
LinkDB
Position
Unknown
AA seq 486 aa
MPSNLSGIYPPDSVNDVAHGLPIDNLGQGAADLLASDVEYRLHLITQEAKKFMVHAKRTT
LTSDDVEYAMEVLNLEPILVPPRPLPQPTFAQVQIPTVSGNSTHTIYYAPDDEIDFATYL
KQPLPPGLASSAGVKWKAHWLAVEGVQPAIPENPAPSARVDSTSPLTLPSTGSAALRPSA
RSHLPQELQLYFGRLTAAIVPSTSPPPSPDGTISDVERQRLAALASLRGDQAVGGILVYL
VKWIAESVQKCLMSPVQVLGYLLDAMEALLDNEAVFVEPYLHQLLAPLMSILLTVPLGPH
PPTSSQQITAAYETRLRASDVLRKIVDDYSSSYPNLTPRLLSTLSQALQSDPFPSPLGAN
HPPAGRYEGALLGISALGSHAVRTCLWGEDVPRALQRLDDLASRLYPTEGRKGKSGLMKA
AIKAMGSMIGPKPENFTGGSMRGEEIVNVFGSNWSRVLEKRPWLGSEMMRMYKERREGMD
VDGVGV
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgccatccaatctatcaggtatctatccaccagattctgtcaacgacgtagctcatggt
cttccaatcgataacctaggtcaaggcgccgccgaccttttggcaagcgatgtagaatac
agacttcatctgataactcaagaagcgaagaaattcatggttcatgccaagcgtactacg
ctgacttcggacgatgtggagtatgctatggaggttctgaacttggagccaatactcgta
ccaccacgtccactccctcaaccaactttcgcccaagtccaaattccaacagtttctgga
aactccacacatactatatactacgccccagacgacgagatcgatttcgctacttatctc
aaacaacccctcccaccgggtttggcctcctcggcgggggtaaagtggaaagctcattgg
ttagctgtagaaggtgttcaacctgctatacctgagaaccctgctcccagtgctagagtg
gattctacatcacctctcacactaccttccacaggctcagcagcgcttcgtccatcagct
cgttctcaccttcctcaagaactccaactctacttcggtcgattgaccgccgctatagtc
ccttccacttcaccacctccttcgcccgacggtaccatctcagatgtcgagcgtcaacgg
ctggcagctttggctagtctcaggggagatcaggcggtgggaggtatcctggtgtatctg
gtcaagtggatagcggaaagcgttcagaaatgtctcatgagtccagttcaggttctgggg
tatctgttagatgcgatggaagctttgttggataacgaagctgtgttcgttgagccatat
ctacaccaacttctcgcccctctcatgtcaatactccttaccgtaccactcggtcctcac
cctccaacctcatcccaacaaatcacagcggcttacgagacccgactgcgagcctcagac
gtccttcgcaagatagtcgacgattattcctcttcataccccaatctcactcccagactt
ctctccaccctctctcaggctctccaatcggatccgttcccgtctcccctaggcgcgaac
catcctcccgcaggaagatacgaaggtgctctcctcggtatatcagctcttggttctcat
gctgtcagaacttgtctctggggtgaagacgtaccaagagctcttcaaagattagatgat
ctcgcttcgagactgtaccccactgaaggtcgtaaaggtaaaagtgggttgatgaaagcc
gctatcaaagcgatgggtagtatgataggacctaaaccggagaatttcacaggcggatcg
atgagaggggaggagatcgtgaatgtatttgggtcgaattggagcagggtattggagaaa
agaccttggttgggtagtgagatgatgaggatgtataaggaacgacgggaagggatggat
gtggatggggtaggggtgtag

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