Tremella mesenterica: TREMEDRAFT_70770
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Entry
TREMEDRAFT_70770 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K04482
DNA repair protein RAD51
Organism
tms
Tremella mesenterica
Pathway
tms03440
Homologous recombination
tms03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TREMEDRAFT_70770
03460 Fanconi anemia pathway
TREMEDRAFT_70770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_70770
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_70770
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_70770
Membrane trafficking [BR:
tms04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
TREMEDRAFT_70770
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
TREMEDRAFT_70770
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
TREMEDRAFT_70770
RecA family proteins
TREMEDRAFT_70770
FA (Fanconi anemia) pathway
Other FA pathway factors
TREMEDRAFT_70770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
ATPase
AAA_24
Motif
Other DBs
NCBI-GeneID:
18498385
NCBI-ProteinID:
XP_007002033
JGI:
Treme1_70770
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MLLKRIINSLPSDLINLLPVLDQAGIKTTENLLFTPHQILLSSIPSIRKDDLDALIAFAL
RRTALISVTADTLLPKEEITWTGFGVYNLDQLLDAWDGVGILEIAGPKKVGKSLLALHAV
LRTLKDGGKAVWIDTDGSFSPIRAKIILESWDVDTTEVLNRLEIRPCFKVEPDLYDIISS
LQIELMVNTLMSTTAQGHAEMIAVMEQLAEMTQTYGLTSIVINTTVSSSPINPLSNFSPT
TIKPALGIAFGYCADVTLLIQETGKVFGLVDEEERDRVRRKPGLRGVVEVLKSRVSAGGR
WSVFETDGIQLFDVVPPPLVDERSERMSRGTVPQRPVHGPLRETLIP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaagcgtataatcaattctctcccttcggatctgatcaatctactacccgtt
ttggaccaagcgggaatcaaaacaaccgaaaacttacttttcacccctcatcaaattctc
ctctcttctatcccttccatacgcaaagatgacctcgacgcgctcatagcttttgcttta
cgacgcacagctcttatctctgtcactgctgatactttactacccaaggaggaaatcaca
tggacaggttttggtgtttataacctcgatcaattattagatgcatgggatggggttggt
atactggaaatagcaggacctaaaaaagttgggaaatcgttgttggctttacatgctgtt
ctgaggactttaaaagatggtggaaaggcagtttggatagatacggatggtagtttttct
cctatccgagctaaaatcatacttgaatcgtgggacgtggatacgacagaagttttgaat
agattggaaattagaccttgtttcaaggttgaacctgatttatacgatatcatctcttct
cttcaaatcgaattgatggtgaatactttgatgagtacaacagctcagggacacgcagag
atgattgccgtcatggaacaactcgctgaaatgactcaaacatacggtctcacaagtatc
gtgatcaacacgacagtctcaagttcacccatcaaccccctatcgaatttctcacccaca
accatcaaacccgctttaggcatcgcatttggatactgtgcggatgtgacgttgttgata
caggaaacaggcaaagtcttcggtttggtcgatgaggaagagagagatagggtgagaaga
aagcctgggttaaggggtgtagtggaggttttgaagagtagggtatctgccggtgggcga
tggtctgtattcgaaacggacgggatccaactgtttgacgtcgtacctcctcctctggtg
gacgagagatccgaacgaatgtcaagaggcacagtaccccaaagaccggttcatggtccc
ctgagggagactttgataccttga
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