KEGG   Tremella mesenterica: TREMEDRAFT_71180
Entry
TREMEDRAFT_71180  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K17908  autophagy-related protein 18
Organism
tms  Tremella mesenterica
Pathway
tms04136  Autophagy - other
tms04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:tms00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    TREMEDRAFT_71180
   04136 Autophagy - other
    TREMEDRAFT_71180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tms04131]
    TREMEDRAFT_71180
   03029 Mitochondrial biogenesis [BR:tms03029]
    TREMEDRAFT_71180
Membrane trafficking [BR:tms04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    TREMEDRAFT_71180
Mitochondrial biogenesis [BR:tms03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    TREMEDRAFT_71180
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_Prp19 ANAPC4_WD40 WD40_CDC20-Fz WD40 Beta-prop_Vps41 WD40_WDHD1_1st Beta-prop_HPS5 BCAS3_WD40 WDR55 Beta-prop_IFT140_1st Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_2nd Beta-prop_TEP1_2nd CPSF_A Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 18498482
NCBI-ProteinID: XP_007003091
JGI: Treme1_71180
LinkDB
Position
Unknown
AA seq 417 aa
MAKSGKQHPDLLCCNFNQDFSCVAVGHKKGYTILNCDPYGKVHQKSQGPTAIVEMLFCTS
LVALVGAADASGSTPPSPRKLQIVNTKRQSTICELTFPTSILAVKMNRKRLVVVLEAEIY
IYDISTMKLLHTIETGPNPGAIIALSPDSERSYLAYPAAPTTTTIPLSSSTVPRPPAPSM
GDVYIFDTISLSAVNVIQAHKAPIAALSLSSTGNMLATASEKGTVVRVFSIPDAQKLWQF
RRGSSNAKIFSINYNLMSTLLAVSSDSSTIHIYRLNPKAIGSDAESSRGDVHSPTPSETP
STTSPPVQPNTGSGATSSLRRRSYHIGKNFISGAAGYMPRSVSEMWEPQRDFAYIKMHSG
GGRSVVAMSGTVPQVMVISSEGFFQAYNIDLENGGECSLMKEFPLLGVEETGADPFT
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggccaagtcgggcaagcaacacccggatctcctgtgttgcaacttcaaccaagacttc
tcatgcgttgccgtaggtcacaaaaaggggtatacaatattgaactgtgacccatatggc
aaggttcaccagaagagccaaggacctactgctatcgtggaaatgctgttctgcacatcc
ctggttgccctggtcggcgcagccgatgcatcaggcagtactcctcctagtcctcggaaa
ttacagatcgtcaataccaagcgtcaatcgaccatctgcgagcttacattcccaacgtca
atcttggccgtcaagatgaatcgtaaacgtctggtggttgtgctcgaagctgagatctat
atctatgatatatccactatgaagctattacacaccattgagactggtcccaatcccggt
gcaatcatagccttatctcccgattcagaacgatcatacctcgcctatcccgccgctcca
accacaaccaccatccccctttcctcctccaccgttccccgtccacccgcaccgtcaatg
ggcgatgtatatatcttcgataccatctctctctccgccgtcaacgttatccaagctcac
aaagcgcctatcgccgctttatcactcagttcgaccgggaacatgctggcgaccgcttct
gaaaaagggaccgtcgttcgcgtattctcgatacctgatgctcagaagttatggcagttc
cgacgaggaagtagtaacgccaagatcttcagtatcaattacaacctcatgtccacactc
ttagctgtatcaagcgattccagcactattcacatatatcgtctcaatcccaaagcgatc
gggtctgatgcagagtcatctaggggagatgtacacagtccaacgcccagcgaaacgcca
agtacgacttcacctcctgtacaacccaacacgggatcaggcgccactagttcgttgaga
cgaaggagctatcatatcggaaagaatttcatcagcggggctgccgggtacatgcctaga
tcagtgagtgaaatgtgggagcctcaaagagatttcgcgtatatcaagatgcactcggga
ggtgggagatccgttgtggcgatgtcagggacagtaccacaggttatggtcatcagttcc
gaaggtttctttcaggcttacaacattgatttggagaatggtggtgaatgttcattgatg
aaggagtttcccttactcggcgtggaagaaaccggtgccgatcctttcacatga

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