Tremella mesenterica: TREMEDRAFT_71264
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Entry
TREMEDRAFT_71264 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_71264
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_71264
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_71264
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TREMEDRAFT_71264
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
TREMEDRAFT_71264
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
TREMEDRAFT_71264
DSBR (double strand breaks repair)
Other DSBR factors
Others
TREMEDRAFT_71264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML
Mis12
Motif
Other DBs
NCBI-GeneID:
18498500
NCBI-ProteinID:
XP_007003113
JGI:
Treme1_71264
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MSDFEDDNDYEAERLRTIASNRALLDSLGFDTNGSSRLNLAKPSASKSNTPASKKRKAPP
VIRDNEPRRRSGRLAGLEVEGEELRVKLEEEEKGRQALRVVERKTRDQMMKLSEMVEDAE
EGEKEDLERYLTEIGKLPNPRPLPDLKSTPSETYTDKDTLPTEIQRLKAQFKNMELKANA
KVTQERVYSMVVHPEKTKTLVFVGDKHGMVGIWDALGPNEETPENDDNTSEAKEEESEGR
IWHVQAHARNSIPCMKIDPVDGSGLFTSSYDCTLRHLDLRTLTSRELFALPNEDTLITHF
DLTPSGQEAWLVDKDGGISHCDFREGGKRRRWIVQDLGRSAKLGGVSVNPLMPHLILTAG
NDQHLRIWDTRHFLSNPQPLNISIPPPPPTAPLSPKVKPAPYPPTHITQEPTKRTLRNGD
VKPTVSAGQDDVKTKVPDEEDTKPTLSDDRNISTPIQDVKTLRSRINTYPTNVTSFESIS
SYLSTTKGKGLLRANYQHGKSCSAAYWDPWGRRILSTSYDDKLRIWSLNPQSLLLDQPLP
STHFQPIKSYPHNCQTGRWLTILRAQWSLNMDFVPHFTVGNMKRSLDVITATGEKIVSLW
ADPVTAVPAVTASHPSRVDHVVGGNTSGRIQLWGSGSG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttcgaagatgacaacgattacgaagcggaaagacttcgtactatagcttct
aaccgagctttactcgattcccttggattcgacactaacggttcttctcgtctcaacctg
gctaaaccctccgcttcaaagtctaataccccggcatcgaagaaacgtaaagctccccct
gtgatccgggataatgaacctagaagaaggagtgggagattggcggggctggaagttgaa
ggagaggaattgagggtgaagttggaagaggaagaaaaaggtagacaagccttaagggtt
gttgaacgtaaaacgagggatcagatgatgaaattaagtgagatggttgaggatgctgaa
gaaggggaaaaagaagatttggaaagatatctaacagaaattggaaaacttcccaaccct
cgtccattaccagatctcaaatcaacaccttcagaaacttacacagataaggataccctt
ccaactgagatacaaagattaaaagctcaatttaagaatatggaattgaaagcgaatgca
aaggttacacaagaaagagtttatagtatggttgtacatcctgaaaaaacgaaaactttg
gtttttgttggtgataaacatggtatggtgggaatatgggacgccctcggacctaatgaa
gaaacaccggagaatgatgacaacacttcagaggcgaaagaagaagagagtgaaggtcgg
atatggcatgttcaggcccatgctaggaatagtataccatgtatgaagatagatcctgtt
gatgggagtgggctattcacatcatcatacgattgtaccctccgacatttagatcttcga
actttaacctcaagagaattattcgctttaccaaatgaagatactctcataactcatttc
gatctcactccatccggacaagaagcttggttggtagataaagatggtgggataagtcat
tgtgattttagagaaggaggtaaaaggagaagatggattgttcaagatttagggagaagt
gcgaagttaggaggagtcagtgtgaaccctctcatgccacatctcatcttgacagctggg
aacgaccaacatttacgtatttgggatacccgacattttctttcaaaccctcaacctctt
aacatttcaatacctccccctccacccaccgctccactatctccaaaagtcaaacctgct
ccttacccccctacacatatcacgcaggaaccaacgaaacgaacattacggaatggtgat
gtcaaacctaccgtttcagctgggcaagatgatgtaaaaacgaaagttccagatgaagaa
gatacaaaaccgactctttccgacgatcgaaacatatccacacccattcaagatgtcaaa
acactacgatcacgtatcaacacttatcccaccaatgtgacttctttcgaaagtatatct
tcttatctatccaccacaaaaggtaaaggtcttttaagagccaattatcaacatggtaaa
agctgtagtgcagcttattgggatccttggggtagaaggatattaagtactagttatgat
gataagttgagaatatggtcactcaatccacaatctcttctactagatcaaccactccct
tcaactcatttccaacctatcaaatcttatcctcataattgtcaaacgggaagatggttg
accatcctacgagcacaatggagtttgaatatggactttgttcctcatttcacagtgggt
aatatgaaacggtctttagatgtgatcactgctactggggaaaagattgttagtttatgg
gctgatccagtcacagccgtacccgccgtcactgcatctcacccttctcgagtggatcat
gtggtgggtgggaacacttccggtcgaatccaactttggggttctgggtcgggatga
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integrated database retrieval system
