Tremella mesenterica: TREMEDRAFT_71303 Help Entry TREMEDRAFT_71303  CDS       T03139                                  Name (RefSeq) hypothetical protein   KO K10597   ubiquitin conjugation factor E4 B [EC:2.3.2.27] Organism tms  Tremella mesenterica Pathway tms04120   Ubiquitin mediated proteolysis tms04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:tms00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     TREMEDRAFT_71303    04120 Ubiquitin mediated proteolysis     TREMEDRAFT_71303  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tms04121]     TREMEDRAFT_71303 Enzymes [BR:tms01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      TREMEDRAFT_71303 Ubiquitin system [BR:tms04121]  Ubiquitin ligases (E3)   U-box type E3    TREMEDRAFT_71303 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ufd2P_core U-box Motif Other DBs NCBI-GeneID:  18498504 NCBI-ProteinID:  XP_007003734 JGI:  Treme1_71303 LinkDB All DBs Position Unknown AA seq 1123 aa AA seqDB search MSKDNSDQHDGPGLTDADKIRLKRLARLQGPDRIPPSSSSPSLTPSTQSTSAVVVPRSEP AAQDSISLSVRAEQQSLDDPGIVRASTPSKAMSSVYAVHPPIREDGPRAKMRSTSTIPPS YEPWENSQIAIIFQVTLESTIAQQSDWRLCWLKDLADELREEGAPVLTSTGILDRLLISR LSLDPKIMARSDDPDIINVLAGMVQDETVFEYLTGCWKRLHAANREVSRLNFTSSEKERW RITSDKTRNLLLSYCGMTLEDPSMFPQPDTKPTGPAEFLPILLALTPSGPGTTPSDHSSA HISHNALGPSDLLPFLNDMALVAEQAISEIITPTLSLFFQEWFKLPRPDILGDEWRRYLG AVVTLVLVKPIAACLPFLSIWMASGVTPEKVEWQSLLGPLTRLSVYPREFPQIWKLNFSN PTNRKRADIDANKSNLRHTLNSLQNSLFTIYNSIIRASPAAREEVLHFFGLVARLNQKRA GMQVDYRNVSSDGFMTNLHYVLLKLFEPAMDVRYSKIDKVDPEYLRSSKLVDIGDETKIR ASKEEADEYYSISVEKSSNFITEVFYLCNVFQHLGIVKTIAQRGKAERNMIDIEKQLKQS EASRAEWTGNPALEAQGEAAIAKLKADLAILHASLHAYDTQLLDPVFYRLNLTFLGFMMT WLVRLVDPHRHHPSPTITLPLSSEAPQQFRMLPEYFFDNVVEYCDFLSRYDPNAFDSSDK DTFITFAITFLSPGYVNNPFLKAKLVSVLAHGLYPVGYWRKGPMFDRLSYHPLSTQYLMP TLIRFFIDVEMTGGHTQFWDKFNFRRDISRIVKSMWENPLHREAFVQSRKDDFDQFIKFI NMLMSDTTFHLEESLTNLAKINHIESLKANAAEWDDRPETERSDLAQQLRQAESSAPFHT QMGLDHVKLIRDFTATTKEPFVTAEIVDRLAATLDENVVMLVGPKMQDLRVADPDRFSFK PKELLAAIAQIYLNLAGEADFIRAVANDGRSYSKELFERFARILKNRAIMTDAEVAEVIS FTQKVEDMRATVMMEDERDIPDEFLDPLLSTLMKDPVILPVSRVVIDRSTIRTVLLSKEL DPFNNMPLKLEDCIPDTELKAKIDAWSADTAVKRSDVMEVDDL NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgtcaaaggataacagcgatcaacacgacgggccaggcctgactgacgctgacaagatc cggctcaaacgcctggccagattacaaggccctgaccgaatacctccttcctcgtcttct ccttcccttaccccctcaacccaaagcacttccgcggtcgtcgtcccgagaagtgaacct gcagctcaagactcgattagtctctcggtccgtgccgagcagcaaagtctcgatgatccg ggaatcgttcgggcgagcactccttcgaaagcaatgtcctcggtttacgccgtccaccca cctatccgagaagacggtccacgagccaagatgcggagcacttcgactatcccaccttca tatgagccctgggagaactctcaaatagccatcattttccaagtcacactagagagtacg attgctcagcagagtgattggcgcttgtgctggctcaaggacctcgcagacgagctgcgg gaagaaggcgctcctgtgctcacaagtactggaattcttgaccgcctgctgatctctcgc ctctctctcgatcccaaaatcatggccagatctgacgaccctgacatcatcaatgttctc gcggggatggtacaggatgagaccgtcttcgaatatctcactggttgctggaagcgactg catgcggcaaatagggaagtctctcgactgaatttcacctcgagtgagaaggaacggtgg agaatcacttccgacaagactcgtaacctgctactgtcatactgtggtatgactctagag gatccttctatgtttccacaacctgacaccaaacccactggacccgctgaattcctgccc attctcctggcgcttaccccctcgggaccgggtaccacgccgagcgaccactcatcagcc cacatttctcacaatgccttaggaccgtccgatcttttaccgttcctcaatgatatggct cttgtcgctgagcaagcaatatccgagatcatcacaccaactctaagtttattcttccaa gagtggttcaaattaccccggccagacattttaggagatgaatggaggcgctatcttggg gcagttgttactctcgtccttgtcaaacctatcgccgcctgtctcccatttctgagtatt tggatggcctctggcgtcacgccggagaaggtcgaatggcagtctttacttggaccactg acccgcctcagtgtgtatccacgggaatttccccagatttggaagctgaatttttcgaat ccgaccaatcgcaaaagagccgacatcgacgctaacaagagcaatttacggcacactcta aattcgttgcaaaactcattgtttaccatttacaacagtatcattcgagcctcacctgcc gctcgcgaagaagttcttcacttttttggactcgtggctcgactgaatcagaagcgtgcg gggatgcaagttgactaccgaaacgtatcatcggacggctttatgacgaatctgcattac gtcctattgaagctctttgagcctgctatggacgtgcgatattcgaaaatcgacaaggtt gatccggaatacctccgttcctcaaagctggtggacattggcgacgagacgaagatccgc gcctcgaaagaagaagccgacgaatattactctatttcagtcgaaaagtcatccaatttc atcaccgaagtgttctacctgtgcaatgtgtttcagcatctcggtatcgtgaagaccata gctcagcgtggcaaagctgagcggaatatgatcgatatcgagaagcagctcaaacagtca gaagcttcacgtgcagaatggacgggcaacccggccctcgaagcacaaggagaggctgcc atcgccaagctcaaggccgatctggccatccttcacgcctcgctacatgcgtacgatact caacttttggatcccgtcttttatcggctaaacctgaccttcctcggcttcatgatgacc tggctcgtccggctcgtcgatccgcatcgccatcacccatcaccgactatcactttgcct ttatcctctgaggcccctcaacagttccgtatgcttcctgaatacttttttgacaacgtt gtcgaatattgtgacttcctatcacgttacgatcctaacgctttcgactcctccgataaa gacacctttatcacgttcgcaatcactttcttgtcccccggctacgtcaataatcccttt ctcaaagccaaactggtatcagtgctagcgcatggactgtatcccgtggggtattggaga aaaggcccaatgttcgaccgcctcagttatcatcctctttcaacacagtacctcatgccc acgctgattcgcttcttcatcgatgtagagatgacgggtggacacacccagttttgggat aagttcaatttccgccgcgacatcagtcgcatagtcaaatccatgtgggagaatcctttg catcgcgaggcgtttgtacaatctcgaaaggacgactttgaccaattcatcaagttcatc aacatgctgatgagcgataccacttttcatctcgaagagtctttaacaaaccttgctaaa atcaatcatattgagagtttgaaagccaatgctgccgagtgggacgaccgccctgagacg gagcgtagcgatcttgctcaacaactgcgccaagcggaatccagcgcccctttccacact caaatggggcttgaccatgtcaagctcatacgcgacttcaccgccacgaccaaggaacct tttgtcacagcagaaatcgtcgaccggttagccgccactttagacgagaatgttgtcatg cttgtgggtcctaaaatgcaagatcttcgagtggcagatcccgatcgtttctcattcaag cccaaagagctcctggccgccatcgctcagatctatctcaacttagctggggaggcagac ttcatcagagctgttgccaacgacggacgaagctactcgaaagagttgtttgagagattc gctcggatcctcaagaatcgggccatcatgactgacgcagaagtggcagaggtaatctct tttacccagaaagtggaggatatgagagcgactgttatgatggaggacgagagggacatt ccagatgaatttttagaccctcttttatcgactctcatgaaagatcctgtcatcctccca gtctctcgcgtggtcatcgatcgaagtacgattcgtaccgtcctcttgtccaaggagttg gatcctttcaacaacatgcctctcaaattggaagattgcattcccgataccgaactgaaa gccaagattgatgcctggtcagctgacactgctgtcaaacgctctgatgtaatggaagtt gacgacttgtaa

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