Tremella mesenterica: TREMEDRAFT_71310
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Entry
TREMEDRAFT_71310 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tms
Tremella mesenterica
Pathway
tms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TREMEDRAFT_71310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_71310
Enzymes [BR:
tms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TREMEDRAFT_71310
DNA repair and recombination proteins [BR:
tms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TREMEDRAFT_71310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
18498507
NCBI-ProteinID:
XP_007003740
JGI:
Treme1_71310
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MARKRSGAKLVSASPSLLAPTLPFSLQDAITHLSLADPRFGNMFQHLPCKPYIPPYTAID
PFRTLVTSIIGQQVSWMAARAINGRFRALFGYEDENGFPSPAQVAATEVQTLKGVGLSTR
KAEYVISLAEHFLSGQLSTELLRDGSDDQIAKALIAVRGIGQWTVDMFLMFSLKRPDVLP
VGDLGVQKGLIRWVLAAHQALPRKKGKNDAKVDRVDEDGGGEIDTRIQTPPPLERQYPQT
PHTPSNASVVRSAVLHTPIKPTDPTPPTPITPLTAPAETLEVPDKELPPPTPQELLAPIK
GHEWDANKAAPLSEGLSVEVLKTRMGGKKVKGGAYLTPGEMEALTQHWRPFRSLGVYYMW
PAGEDF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagagatcaggggccaagctggtttcagcatctccttctttactggccccg
acactcccgttcagtctccaagatgctatcacccacctttccttggccgatccgaggttc
gggaacatgttccagcatctcccttgcaaaccctacatcccaccgtacaccgccatcgac
ccgttccgtaccttggtcacctctatcattggtcagcaagtgagctggatggcagcgaga
gccatcaatggacgttttcgagctcttttcggctatgaagatgagaatggctttcccagt
cctgcccaagtggcagcgaccgaagtgcagacgctcaaaggggtgggattgagtacgagg
aaggcggaatatgtcatctctctagcagagcacttcttgtctggtcaattgtccactgaa
ctgctccgggacggtagcgatgatcagatcgccaaagctctcatcgccgtacgaggcatc
ggacaatggacggtggacatgttcctcatgttctctctcaaacgtcctgatgtgctcccg
gtcggtgatttgggagtccaaaaaggtctcatacgctgggtcttggccgcacaccaggca
ctgcctagaaagaaggggaagaatgacgcaaaagttgaccgagtggatgaggacggtggt
ggagagatagacaccaggatccaaacacctcccccattggagcgacaataccctcaaact
cctcatacgccatcgaacgcttctgtcgtcagatctgccgtcctgcacacgcctatcaag
cctacagatccgactcctccaacccctatcaccccactcactgcccccgctgagaccctg
gaagtacccgacaaggagctaccgccgcccacgccacaagagctgctggctccaataaaa
gggcatgaatgggacgccaacaaagctgcccctctgtctgaaggtttgagcgtcgaggtg
ttgaaaacgaggatgggaggtaaaaaggtcaaaggaggggcgtacttgacgcctggggag
atggaagcgttgacccaacattggcgacctttccggtctttgggagtgtattatatgtgg
cctgcaggtgaagatttctga
DBGET
integrated database retrieval system
