Tremella mesenterica: TREMEDRAFT_71468
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Entry
TREMEDRAFT_71468 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08331
autophagy-related protein 13
Organism
tms
Tremella mesenterica
Pathway
tms04136
Autophagy - other
tms04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
TREMEDRAFT_71468
04136 Autophagy - other
TREMEDRAFT_71468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_71468
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_71468
Membrane trafficking [BR:
tms04131
]
Autophagy
Autophagosome formation proteins
ULK complex
TREMEDRAFT_71468
Atg1 complex
TREMEDRAFT_71468
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
TREMEDRAFT_71468
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
18498541
NCBI-ProteinID:
XP_007004359
JGI:
Treme1_71468
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MSATPLRPAAYYPARPLSRPVSTPASPTPSQVATGLAPSSDPSSPTAGQPSREDQVIHHF
YLKTVGVLVDGRLTHFGSVVDKNGESRQDRWFNLTLPDVDLHRSDLHIYRQVSLFPLIRQ
PGPLPVDLCTIPPLLIAFILDTSDLPGGQALMWNRASGKSKIDMGLLSGKGKGREHQRSG
IILERWTFRATVTPADQTTSSVSEARIAFRFGVVHFRALYSLLRLLPAFRMFRRLRRAGN
GLRLGIKLWAPEGYPNSKQGLTDAWEVMENGLVGLDTGLDSLVGEEGAPPELKQHFDLPP
LDAFGFRYTLNAAYRSEIEFHVEDMESVLSEKFVDMDEDFFTPTVARDRLADEARVSSAE
LAVRPTSRKQSLPTAIPTNPSPIPQRQQPATLESFARPSGSRLPSGVTPGTMPSGSAGGM
FDRWGPLAEGLPFAGAPVRPSGGSKVTVAARRLSGHSVHPFASASPSTSVLRSAPFVGQV
TPSPVNRPRLSSSKPSSIGRTSSYLSQSGRSFTHAQLASASPPVTGGMSGVQYSSNASPK
TISPISPSSLTFSKQPVPRSLSGRPPYMASSSSSPFIAGSLERDSSLPSPPGTAPQIIQR
YSSYSSRQRVNSGLNPTQTGSHSSGDGSPGAGSSNLMRRMSTRQSQESGLRHSLEVPIEA
GSDNEDIQAFLKALDSLPQPPSMAAQAAYASRPNLPSTSSSLSNPSVSASSIQPAGQDQA
LQPSSASNTRAPLTKALIDLQLKQMVGSFTFNTKKFATSFTSLVPQDRSPTPNAPIAPTP
RPSAGMGLLSASRPSSAIRRVSAAGGEHDPARPTYRRQASGGSPLSKEATLLPNPADIPL
PEASPSFLVSMNKPHAPGSARSLPGPASAPLVEDKAMPPELRSVGVMPIPMPPVEMLSPQ
TTGGTSTTDSTRTLRRGPVLLRGGFGDQRIMGGKASSSPSHSPIRDFRLRAADNKQVEEE
PPAMTRPQTAGLQGGRYRLASASRDIPTVGVTQCYGQGRITAPSSLGGPVEEERRGRSGR
INSEGGEKRGNIMSTPDEDHIEDLERFGEMSIENRRE
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccactcctctccgtccagctgcgtattatcctgcccggcctctctcacgtccg
gtgtcgaccccagcgtctccgacgccttctcaagtcgcgaccggacttgcgccttcgtct
gacccatcttccccaacggctggtcaaccgagtcgagaggatcaggtgatccatcacttt
tatctcaagactgtgggagttctcgttgatggtcgcttgacgcatttcggtagtgtggtg
gacaagaatggagagagcaggcaggatcgttggttcaatctcactctacctgatgttgac
cttcacagatccgacttgcacatataccgacaggtctcgttgtttcccttgatccggcaa
cctggacctctgcctgtcgatctatgcaccataccgcccttactcatagcttttatcctc
gatactagtgaccttcctggtggtcaagctttgatgtggaaccgagctagtggcaagtcc
aagattgacatgggcttgttaagtggtaaagggaaaggcagggaacaccaacgcagtggg
atcatcctcgaacgatggacctttcgtgctactgtgacaccagcggatcaaactacctcg
tctgtatcagaagcgagaattgcgtttcggtttggtgtcgttcacttccgtgccctctac
tcacttcttcggctactcccagctttccgaatgttccgtcgtcttcgtcgcgccggtaac
gggctacgacttggtatcaagctttgggcaccagagggatacccaaactcgaaacaaggg
ctaacggatgcatgggaagtgatggaaaatggtctggttggtctggataccggactggat
tcactcgtcggcgaggaaggagcgccaccagagttgaagcagcatttcgacctacctccc
ctagacgctttcggttttcgttatactctgaacgccgcctacaggtctgaaattgaattc
catgtggaggacatggagtcggtcttgagcgagaagtttgtcgacatggacgaagacttc
tttactcctacggtggcgcgtgatcggctggctgatgaggctcgggtatcgtcagcggaa
ttagcagtcagacctacatcaaggaagcaatccttgccaactgctataccgacgaaccca
tctcctatacctcaaagacaacaaccagctacccttgaatccttcgcgagaccaagcggt
agtcgacttccgtctggtgtgacacccggaacgatgccgtcagggagtgcaggcggaatg
tttgatcgctggggtccattggcagagggtctcccttttgccggcgcacctgttcgacct
tctggcggatccaaagtgacagttgccgctcgtcgtctctctggtcattcggtccatccc
ttcgcttcggcatcaccctccacctccgtccttcgatcagccccctttgttggccaggtt
actccctcgcctgtcaatcgccctcgattatcttcctccaaaccatcctcaatcggccga
acgagttcgtacctgtctcagtcgggacgttcattcacgcatgctcaactagcatcagct
tcccctcccgtgactggaggcatgtcgggagtgcaatattcctctaatgcatcaccaaag
acgatctccccgatatcgccatcctcactgaccttctccaaacaaccggtccctcgtagc
ttatccggtcgacccccgtatatggcttcatcaagttcctcacctttcatcgctggctca
ctcgagcgagactcatctcttccttcacctcctggtactgctcctcaaatcatccaacgc
tactcgtcctattcatcacggcaacgtgtcaactctggactgaaccctacacagacaggc
tcgcacagtagcggagatggaagccctggcgcaggttctagcaatcttatgcggagaatg
agcactcggcaatcacaggaaagcggcttgcgtcacagtctcgaagtcccaatagaggct
gggagtgacaatgaagatatacaagccttcttaaaagcgttagattctctacctcagcca
ccttctatggcagcccaagcagcttatgcctcccgacctaatctgccctcgacctcatct
tcactgtcaaacccatcggtatctgcgtcttccattcaacctgcaggccaggatcaagct
ttacagccgagtagtgcgagtaacacccgagctcctctcacgaaggcgttgatcgatctt
caactgaagcaaatggtgggcagctttacgttcaacacgaagaagtttgcaacttcgttc
acttccctcgttcctcaagatcgatcgccgactcccaatgctcctatagcccctactcct
cgaccaagtgctggtatgggtttactatctgccagtcgaccgtcctcggccattcgtcga
gtttccgctgctggtggcgaacacgatccggcccgtccgacataccgtcggcaggcgtcg
ggtggtagtcctctgagtaaggaggctactcttcttccaaatccagcagatattccactt
ccagaagcatcaccttcgttccttgtctcgatgaacaaaccccacgctcctggctcagca
cggtcactacctggtccggcatccgcaccattggtagaagataaagcaatgcctccggaa
ctccggtcagtgggtgtgatgcctattcccatgccaccagtcgagatgctttcaccacag
actacaggaggaacatccacaacggattcaactcgtactttacgtcgtggacccgtgctt
ttgagaggaggatttggagatcaaaggattatgggaggtaaagctagttcatcaccttct
cactctcccattcgagatttccgacttcgagcggcggacaataaacaagtggaagaggaa
ccacctgcgatgactcgtcctcagacagcaggattacaaggtgggagatatagactcgcc
tctgcttctcgtgatatccccacagtaggtgtgacacagtgctacggtcaaggacgtatc
actgctccaagttctttgggtggtccagtggaggaagaacgaagagggagaagtggaagg
atcaatagtgaaggtggagagaagagagggaatattatgagtaccccagatgaggatcat
atagaggatctggaaaggtttggggagatgagcatagagaataggagagaatga
DBGET
integrated database retrieval system
