Tremella mesenterica: TREMEDRAFT_71580
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Entry
TREMEDRAFT_71580 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14006
protein transport protein SEC23
Organism
tms
Tremella mesenterica
Pathway
tms04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TREMEDRAFT_71580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_71580
Membrane trafficking [BR:
tms04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
TREMEDRAFT_71580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
18498563
NCBI-ProteinID:
XP_007004395
JGI:
Treme1_71580
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSTNNFEDVEDRDGIRLSWNAWPSSRIEATRTVVPISALYTPLKEREDLPPVLYEPVTCK
ASCKAILNPFCQIDVRGKLWICPFCLQRNPFPPHYKDITTTNLPAELLPKYTTIEYTLSR
PAQIPPIFLYVVDTCVDEDELKALRETLVVSLSLLPPTALVGLITFGTMTMVHELAYSDC
PKSYVFRGSKEYQPKQIADMLGLNPSNRMQAVRPGQPMPAPAASRFLMPAQACEFQLTSI
LEGLQRDPWPVEQDKRPLRCTGVAMGVAVSLLETTFPNTGARIMLFSGGPPTDGPGLVVG
PELREPIRSHHDIDRDSVKHFKRATKYFEGLSKRASANGHAIDIYAGCLDQVGLLEMKSL
TNATNGSMVISDSFMTAIFKQTFLRSLGKDDDGHLKMGFNGTFEVLTTKELKISGVIGHV
ISANKKTPSVGETEIGIGQTSAWKVCSLTPKSSLATYFEVVTPAGQPLQPNQTGLIQFVT
HYQHSSGQFRLRVTTIARTFHEGGHPAIAASFDQEAAAVLMARIAVFKAEIDDSPDVLRW
LDRMLIRLCQKFAEYRKEDPTSFQLSPNFSIYPQFMFHLRRSQFLQVFNNSPDETAFYRH
VLNDADVNNSLIMIQPTLMSYTFDVEPHPVLLDSVSIRPDVILLLDTFFHILIFHGETIA
QWRKANYQDQEGYENFKELLESPITDAQDLLEDRLPIPRYVVCDQGGSQARFLLSKLNPS
TTHMSGGYGGGGNGGQAIFTDDVSLQVFMEHLKRLAVGASTS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacaactttgaagacgtagaggatcgggatggtatccgcctatcttggaac
gcatggccgtcaagtaggatagaagctaccaggactgttgtacctatctctgctctttac
actcctctgaaagaaagggaagatttaccacctgtcctgtacgaacctgtcacttgcaaa
gcttcttgtaaggccattctgaaccctttttgccaaatcgacgtccgtggaaaactatgg
atatgtccattctgtctacaacggaaccctttccctccgcattacaaagatataacaact
acaaacctcccagctgaacttcttccaaagtacaccaccatcgaatacacactctctaga
cccgctcaaatccctccgatcttcctctacgtcgttgacacttgtgtggacgaagatgag
ctcaaagctttgcgcgagactttggtcgtcagtcttagcttgttacctccgactgcactg
gtgggattgattacttttggtaccatgaccatggtacacgaactcgcatattccgactgt
cccaagtcctacgtcttccgaggatccaaagaatatcaacccaaacaaatcgccgatatg
ctaggactgaacccgtccaacaggatgcaagcggtaagacccggtcaacccatgcctgcg
ccggctgctagccgattcctcatgcctgctcaagcgtgcgagttccagctcaccagtatc
ctcgagggattgcagagggatccgtggcctgtggaacaggacaaacgtcctttgagatgt
actggggtagccatgggtgttgctgtttctctcctcgagaccacgttccccaatacggga
gctcgcatcatgctcttctccggaggtccacccaccgacggaccaggtctagttgtaggt
cccgaattgagagaacctatcaggtcgcaccacgacatcgatcgtgacagtgtcaagcat
ttcaaacgcgctacaaagtactttgagggtctgtccaaacgcgcgtcagccaacggccat
gcaattgatatctacgcgggatgtttggaccaagtcggtctgctagaaatgaaatcgttg
accaacgcgaccaatgggtctatggtcatctcggactctttcatgaccgccatcttcaaa
cagacctttttgcgatccttggggaaagacgatgatggtcatctgaaaatgggtttcaat
ggtactttcgaggtactcaccacaaaagaactcaagatctccggagtcatcggccacgtc
atatcagccaacaagaaaactcccagtgtgggtgagactgaaatagggatcggtcaaacc
tccgcatggaaagtttgttccctcaccccaaaatcctcccttgccacatactttgaagtt
gtcactcctgccggtcaacctctccaacccaatcaaaccggtttgatccagtttgtgacc
cattatcaacattcttctggacaattccgtctacgagtgactaccattgctcgaaccttt
cacgaaggcggacacccagctatcgccgcttcgttcgatcaagaagccgccgcggtgctc
atggctcgtatcgctgtcttcaaagcggagatcgatgacagtccagatgtgttgagatgg
ttggatagaatgttgattcggttgtgtcagaagtttgccgagtataggaaagaagatccg
actagtttccaattgagtccgaatttcagtatttacccgcaattcatgtttcatctgaga
aggagtcagtttttgcaggtgttcaataattcaccggatgagacggctttctaccgccac
gtattaaacgacgccgatgtcaacaactccctcattatgatccaacccaccttaatgtcc
tacacattcgacgtcgaaccccatcccgtcctactcgattcagtttccatccgacctgac
gtcatccttctcctcgacacattcttccatatcctcatattccacggtgagaccatagct
caatggcgtaaagcgaattatcaagatcaagaaggatatgaaaatttcaaagaattacta
gaaagtccaatcaccgatgcacaggatctgttagaggatcgattacctatacctcgttat
gtggtctgtgatcaaggtggaagtcaagctagattcttgttgagcaagttgaatccgagt
actacacatatgagcggaggttatggaggaggtgggaatggtggtcaagctatatttacg
gatgatgttagtttacaggtgtttatggaacatttgaagaggttggccgttggagcttcg
accagttag
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integrated database retrieval system