KEGG   Tremella mesenterica: TREMEDRAFT_71583
Entry
TREMEDRAFT_71583  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
tms  Tremella mesenterica
Pathway
tms03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TREMEDRAFT_71583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_71583
Messenger RNA biogenesis [BR:tms03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     TREMEDRAFT_71583
    U7-dependent histone pre-mRNA processing factors
     TREMEDRAFT_71583
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 Nod1 RRM_10 Sigma70_r4_2
Other DBs
NCBI-GeneID: 18498564
NCBI-ProteinID: XP_007004397
JGI: Treme1_71583
LinkDB
Position
Unknown
AA seq 339 aa
MAPSRTVFVANLAFDVSEEQLANVFSEVGPVQSAEIKFDNQTGRPKGYAFVTFYDEATAI
SAIRNLRDTNVNGRTLRIELSNDDPASSRRRRDHGPPAPVNRDLTPPVHAPYRDEPNIDL
YNLPQGQEVLPGEKATDVISRTLAAVTPGQMQEVMAGVKTLITSHPEQARQLLASQPQLA
YALFQAMLLMKIVDPSILQRISPLPPAAPPTNFPPVSQAPTSFPPYPPTQSAPTYPAVPA
QTYATAPATAQTSYPAATAQPSYGYPPVQQPTQPAQPALPAHLQTALASLPEDQRAMLTQ
VLQLTPDQINRLDAGQKATIMQLVSLFVVQRQQFLGAAA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcacccagtaggacagtttttgtcgcaaatttggctttcgacgtatcagaagaacaa
ctcgccaatgtattctcagaagtcggtcctgtccaaagtgccgagatcaagttcgataac
cagactggtcgaccgaaagggtatgctttcgtgactttctatgacgaagccacagccatt
tcggccatccgtaatctccgcgacacaaacgtcaacggtcgtaccctccgtatcgagctt
tccaacgacgatcccgcctcctctcgtagacgtagagaccatggtcctcccgctcctgtc
aatcgagacttgacgcctccagtacatgcaccatacagggacgaaccaaatatcgatctt
tacaatttacctcagggccaagaagtgttgcccggggaaaaagccacagatgttatctct
aggactttagccgctgtcactcctggacagatgcaggaggtcatggctggcgtcaagaca
ttgataacttcccatccggaacaggcgagacagttgttggcttctcagcctcagttggca
tatgcgctttttcaagctatgcttttgatgaagattgtcgatccatccatccttcagcga
atctcccctctaccacccgcagctccaccgaccaactttcctcccgtttctcaagcgcca
acaagctttcctccctaccctccaacccaatctgccccaacttatcccgcagtccctgct
caaacctatgctacagccccagcaacggcccagacgtcttatcccgcagcaacggcccag
ccgtcatacggctaccccccggttcaacagcctactcaacctgctcagccggctctgcct
gcgcatcttcaaaccgctctcgcttctttgccagaggaccaacgcgcaatgttgacacag
gttttacaattgaccccggatcagatcaaccggttggatgcgggacaaaaagctacaatc
atgcaattggtcagtctttttgtggtacaaagacaacaattcctcggtgcggcagcgtga

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