KEGG   Tremella mesenterica: TREMEDRAFT_71584
Entry
TREMEDRAFT_71584  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_71584
Spliceosome [BR:tms03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    TREMEDRAFT_71584
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF12 NBCH_WD40 ANAPC4_WD40 Beta-prop_IP5PC_F WDR90_beta-prop_4th Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_Nup120_160 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 18498565
NCBI-ProteinID: XP_007004398
JGI: Treme1_71584
LinkDB
Position
Unknown
AA seq 370 aa
MNGQYRNPYSHTPTPEPMGMANGQGYMNPGPGLGGMTGLPNGNGNNGGTVPGVKVQPLLC
SGHTRPVVHLQFSNLLDDGTYLLISSCKDGNPMLRSWLGDWIGTFIGHKGAVWSSKISLD
TTRAVTGSADFSAKIWDCATGEALHSFTHNHIVRTVALNPQQTSQYLLTGGHEKKIRLYD
LGRPDADPLILGKNSEGLSCEGVIRSIVWDEFHGGTVGVSAGEDGLVRWWDLRSLSQTAS
LDLGDPVTSMELAHGGGTLSVTAGKKVHFLDIQRQHPPVTIPLSQPPTSASLHPFDRDRF
VAGSTADPWVRVYDLDTGAEKEVYKGHHGPVLCASYSPDGEVYASGSEDGTIRLWQTNPG
KSYGLWQTAE
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaacggtcagtatagaaacccatactcgcacaccccgacaccagaacccatgggtatg
gcaaacggacagggttatatgaatcccggcccgggtctgggtggaatgactggactcccc
aatggcaatgggaataacggaggaactgttccaggagtcaaagtccaacctcttctctgt
tcaggacatacgagacctgtggtccatcttcaattctccaatttactggatgatggtacc
tacctcctcatatcctcgtgcaaagacggaaatcctatgctcagaagctggttaggagac
tggattgggacgttcataggtcacaaaggagccgtttggtcttccaagatctctctcgac
acaactcgggccgtcaccggttctgccgatttttctgcaaagatatgggattgcgctacc
ggcgaagcacttcattccttcactcacaaccatatcgtccgcaccgttgccttgaatcca
caacagacttcacaatatcttttgaccggagggcacgaaaagaagatccgactatacgat
ctcggtcgtccagatgccgatcctctcattctgggcaagaactctgagggtctgtcttgc
gagggagtgatccgtagcattgtatgggatgagtttcacggcgggaccgttggggtcagc
gcgggcgaggatggactagttagatggtgggaccttcggtctctatctcaaaccgcctca
ttagacctcggagatcccgtgacgtcaatggagctggctcatggtggcggtacgctgagt
gtgaccgctggtaagaaggtacatttcttggacatacagcgtcaacatccccctgttaca
attcctctctcccaacctcccacgtcggcttcgcttcatccgttcgacagagaccgattc
gtagctggatccacggcggatccttgggtcagagtgtatgatttggacactggtgcggag
aaggaagtgtataaaggtcatcatggaccggtgttgtgtgcttcgtactcacctgatggg
gaagtgtatgcgagtgggagtgaggatgggacaatccgactgtggcagacgaaccccggc
aaatcttatggtctatggcaaacggcagagtaa

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