Tremella mesenterica: TREMEDRAFT_71942
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Entry
TREMEDRAFT_71942 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
tms
Tremella mesenterica
Pathway
tms00520
Amino sugar and nucleotide sugar metabolism
tms01100
Metabolic pathways
tms01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
TREMEDRAFT_71942
Enzymes [BR:
tms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
TREMEDRAFT_71942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-GeneID:
18498647
NCBI-ProteinID:
XP_007005890
JGI:
Treme1_71942
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MASEKPENIITVGHDRFGFDSRVEMDTLRSLYLSPSFVKDGDATKNISGAPPKDYGAQST
YDKSSNSIQFTTVAKFPPVKLLPNAERKRILVTGGAGFVGSHLVDRLMLLGHEVTVLDNF
FTGSRTTVSHWVGHPNFEMVRHDVVNPFLIEVDQIYHLACPASPPHYQYNAVKTLKTSFL
GTMNMLGLAKRTKARFLITSTSEVYGDPEEHPQREDYWGHVNCIGPRACYDEGKRVAETL
TYGYMRQDGVDVRVARIFNTFGPRMNPYDGRVVSNFIIQALKGEDMTVYGDGNQTRSFQY
VHDLVDGLILLMNGDETRPVNIGNQHEFTIIEFAEAVRDIVEKVQKEQGNPLAKRVNIIH
KEMPTDDPQRRRPDTTRAKETLGWQPQFNVRQGVEEMTGTLLRCSNRRGSVVTWYGVHGS
MVWYTITSGMEIVT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgagaaaccagagaacatcatcactgtcggtcacgaccgctttggtttcgac
tctcgtgtcgaaatggacactctcaggagtctttatctttctcctagttttgtcaaagat
ggtgacgccaccaagaacatttccggtgcacctcccaaggactacggagcccaatcgact
tacgacaagagctccaactcgatccaattcaccacggtagcgaaattccctcccgtgaag
cttctcccgaatgccgagaggaagaggatcttggtcaccggaggtgccggtttcgtagga
tctcacctcgttgaccgtctcatgcttttgggacatgaggtgactgtattggacaacttc
ttcacaggttcgagaaccacggtgtctcattgggtcggtcacccgaactttgagatggtc
cgacacgatgtggtcaaccccttcttgattgaagtggaccaaatctaccacttggcttgc
ccagcctctcccccgcactaccaatacaatgcagtcaagaccctcaagacttccttcttg
ggcactatgaacatgctcggtcttgccaaacgtaccaaagctcgtttcctcatcacctcc
acttctgaagtgtacggtgaccctgaggaacaccctcagcgtgaagattactggggtcac
gtcaactgtatcggacctcgtgcttgttacgacgaaggtaaacgtgtcgccgaaaccctc
acttatggctacatgaggcaagatggtgtcgacgttcgtgtcgctcgtatcttcaacacg
ttcggaccccgtatgaacccatacgacggtcgtgtcgtttccaactttatcatccaagct
ctcaagggcgaggacatgaccgtctatggcgacggtaatcagactcgttctttccaatat
gttcatgaccttgtcgatggtctcattctcttgatgaatggagatgagactcgtcccgtc
aacatcggtaatcagcatgagttcacgatcatcgaattcgccgaagcagtccgtgacatc
gtggaaaaggttcagaaggaacaaggtaacccccttgccaagcgtgtcaacatcatccac
aaggagatgcccacggacgaccctcagcgtcgtcgcccggacactaccagggctaaggag
actctcgggtggcagcctcagttcaacgtcaggcaaggtgtagaagagatgacaggtacg
ctactacgctgctcgaatcgcagagggtctgttgtgacctggtacggtgtgcatgggtct
atggtatggtatacaattacgtctggcatggaaatagttacttag
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