KEGG   Tremella mesenterica: TREMEDRAFT_72241
Entry
TREMEDRAFT_72241  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K11360  transcriptional activator SPT8
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tms03021]
    TREMEDRAFT_72241
   03036 Chromosome and associated proteins [BR:tms03036]
    TREMEDRAFT_72241
Transcription machinery [BR:tms03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     TREMEDRAFT_72241
Chromosome and associated proteins [BR:tms03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     TREMEDRAFT_72241
SSDB
Motif
Pfam: Beta-prop_SPT8 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 18498704
NCBI-ProteinID: XP_007006943
JGI: Treme1_72241
LinkDB
Position
Unknown
AA seq 679 aa
MTSEDEDDEDEYDEDMFDEDGGVNGVGVNGEVNEEDGEDQDQDQDVSDEPSGEEDDEEDD
EEAEDDEEDEDDEDDEDEEEDDDDEDMEPLEEDREGDKDITMVEQPSDTIQANQPCYNPQ
LPHLLRRALFVPPFSLHSPPSTLSIEAIVAIPIPSPVHSIATSLCSSWLLAGAQDGFVRA
YDLYASVNGQQSMTSLLKANMGMGEGINKTGVGKGWWVNEVEGLGGMRAEPVYSMTCESD
ALWSLTGTKSGCINLYTLRHSPGHHVHTFKGHTNVVSCLSLLPDERSFISGSWDGTLREW
DLNTGQTVRKYPSHGAQFSSISLRPYNPPSSPSPSQGDGIILDGTSISIKQDLSHNIDLP
TEPILPTDLAQPTLSPSMTPADNHPTQTPHFTETSQLVPVSDTVNPVVPSAIPDTDIEMD
APSPYDPLFDDDPTSPPLPPTSNLPNGHDTTTNSVNPTNSTEVNGVENGSLFVPLPTPIP
KGVGAAAQIPILTKERYNDMSDDILLTSSMDGQVTLIDRRVKDGGVGRLLAGEKAPPWCM
STCWAANGNQILAGRRNGTIDIWDIRRTSSTASNLLRTLRTPAESGPVSCVVPFPDGRHV
ATASQDNVRLWNTIDYFQPEESIRRPKSRPPFKIIAGHHGGLISSMIVDPTCRFLITSSG
DRGWSGESTKVVLIHEIKC
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgacaagcgaagatgaagatgatgaggatgagtatgacgaggatatgttcgatgaggat
ggaggggtcaatggtgtaggggtcaatggggaggtgaatgaagaggatggtgaggatcag
gatcaggatcaggatgtcagcgatgaacctagtggagaagaagacgacgaggaggacgat
gaggaagccgaagacgatgaagaagatgaagatgacgaagacgatgaagatgaggaggag
gatgatgacgatgaggatatggaacctctcgaggaggatcgagaaggggataaagatatc
accatggtggaacaaccatccgacactattcaagctaatcaaccatgttacaatccccaa
ctccctcatctcctacgtcgagcacttttcgtccctcccttctcccttcattcccctcca
tccacattatctatagaagctatcgtcgccatcccaatcccttcgccagtacactccata
gccacctccttatgttcttcttggctcctcgcaggtgctcaagatgggttcgtaagagcg
tacgacctttatgccagtgtgaacggacaacaatctatgacttctctgttgaaagctaat
atgggaatgggagaaggtatcaataagactggagtgggtaaaggttggtgggttaatgaa
gttgaaggattaggaggtatgagagctgaaccggtttattctatgacttgtgagagtgat
gcgttatggtctttaactggtactaagtccggatgtataaacctatacactcttcgacat
tccccaggacatcatgtacatactttcaaaggtcatacaaatgtcgtttcttgtctgagt
cttttacccgatgagaggtcattcatcagtggttcgtgggatgggacattgcgggaatgg
gatttgaacactggtcaaactgtccgaaaatatccttctcacggggcacaattctcctcc
atctctttacgtccttacaatccaccttcatctccatccccttctcaaggagatggaatt
atcttagatggaacctccatctccataaaacaagacttatctcataatatcgatctacct
accgaacccattctccccacagatctcgcacaacccactctgtctccgtccatgacacca
gccgataaccacccaacacaaacacctcacttcactgaaacctcccaactcgtccctgta
tccgacacagtcaaccccgttgttccctccgcaattcccgatacagacatcgaaatggac
gctccatcaccatacgatcctctattcgatgacgaccctacttcacctccacttccaccg
acgagcaacctccctaacggtcatgacacaaccacaaactcagtcaatcctaccaattct
accgaagtcaatggagtagagaacggttcactcttcgtcccattacccactccgattcct
aaaggtgtaggggctgcggcacaaatacccatcctgactaaagagagatataacgatatg
tctgatgatatcttgttgactagttctatggatggacaggttactttgatagatcgtcgt
gtgaaagatggaggagtaggcaggttattagctggtgaaaaagctccaccttggtgtatg
tctacatgttgggctgctaacggtaatcaaatcttagctggaagaaggaatggtactatc
gatatatgggacattcgacgaacttcttcaacagcttcaaatttacttcgaacccttcga
acacctgcagagtcgggaccggttagttgtgtggtacctttcccagatggacgacatgta
gctacagcatctcaggataatgtaagattatggaatacaatcgattattttcaacctgaa
gaatctatccgtagaccgaaatctagaccaccgtttaagatcatagctggacatcatggt
ggtttgatttcttcaatgatcgtcgatcctacttgtagattcctcattacttcttctggt
gatagaggttggtcaggtgaaagtacaaaagtagttttgatccatgagattaaatgttga

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