Tremella mesenterica: TREMEDRAFT_72470 Help Entry TREMEDRAFT_72470  CDS       T03139                                  Name (RefSeq) hypothetical protein   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism tms  Tremella mesenterica Pathway tms03020   RNA polymerase Brite KEGG Orthology (KO) [BR:tms00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TREMEDRAFT_72470  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tms03021]     TREMEDRAFT_72470 Enzymes [BR:tms01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TREMEDRAFT_72470 Transcription machinery [BR:tms03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      TREMEDRAFT_72470 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  18498742 NCBI-ProteinID:  XP_007008088 JGI:  Treme1_72470 LinkDB All DBs Position Unknown AA seq 1457 aa AA seqDB search MADWYQVDHNDKSYVAQDVPKRIKHIQFQPFTPKDIVRISEVEVSVADLYVNNEDGSRTT AKDGPLDGRMGPNEKGRRCLTCGEEPAKCVGHYGFIKLALPVFHIGYFRPTINMLSCICK TCSRILLPRQERETFLRRFRHANIDSRQRTSANKSVLTLCKKQNICAHCGAANGPVKKVG AMKIVHEPFRAKKMGAMKADFESKFTTAIADDITLKGNLGSVVEDLNPVKVLALFQRITA EDCELLSLHPEVGRPEDYIWRYVSVPPPAIRPSVASESGNNEDDLTVKLAEIAHYNKLLQ LTMESGRGIEQIMANWENLGQVVALYINSQTPGLSVPGSKPNRGFVQRLKGKQGRFRGNL SGKRVDFSGRTVIGPDPNLRIDEVAVPEKVAVKLSYPERVNNYNIVAMRQAIIHGAKLHP GANILERKAPDGTTVRTALHMIKDVERRTLVARELKIGDVVHRHVRDGDIALFNRQPSLH KLSIMCHRVRVRPWRTFRLNECVCNPYNADFDGDEMNLHIPQTEEARTEALELMSVKKNL VTPRNGEPIIAAIQDFITGSFLLSRRDRFFSRQQFTQICSFFCDADLDIDIPPPTIWKPQ RLWTGKQIFNVLMKPNRRSRIKVNLEAKCRTMKDPDPKDHFPPDMSPNDGYLVIVNSEIM CGVFDKNTVGDGKKKSVFGVILRDYGPDEAAAGMNRLAKLAARWLANQGFSLGINDVIPG PKLHLSKDGKVEEAYKYCDDLIEKAKKGLLENAPGCDQDTTLEQQISGTLSKVRGEVGEL CMQDLSRHNAPLIMATCGSKGSVINVAQMVACVGQQIISGNRIPNGFQDRSLPHFHKKSR NPPSKGFVRNSFYTGLSPTEFLFHAISGREGLVDTAVKTAETGYMARRLMKAMEDLSTHY DLSVRNSEGGVVQFQYGDDMLDPACLEGDATPVDYGRTWTHASRIASRGGRALLPYEVLA IAQRIFPESAEVTEPQTKRNRRGRSTKKIVSTEMLTGWESCHDKFRENTFAFVRDNIVKV MADQRLSRGLPPADTLEDAEEYGDLLVPDDFAIKQVLDNTNKVSQDQIRTFLEICRIRYL RSKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKTISTP IITAELVNATSEHAARIVKGRVEKTVLGDIASVIEESWSNAMGYIMVHIDLEAVQRLQLE ITLDSIKESLIGSKLKLTQSSFSFHKGSRIQIYPEVSGKGDKTEGLYERLKALKRALPDV QIKGLPQADRGVITKDEKNQNINRLLVTGYGLAEVMGTDGVDGRRTKTNHVMETAEVLGI EAARTTIYNEIQHTMQSHGMSIDPRHVMLLGDVMTYKGEVLGITRFGVQKMKDSVLMLAS FEKTTDHLFDASLFSKKDEIQGVSECIIMGTPAPSCGTSMASIVTPAPLLPGRKRLLFED AYKRGQERINRAGMEWE NT seq 4374 nt NT seq  +upstreamnt  +downstreamnt atggcagactggtatcaggtggaccataatgacaagtcttacgtggctcaggacgttccc aagagaataaaacatatccaattccagcctttcacacctaaggacattgtcagaatatca gaggttgaagtctccgttgccgatctatacgtgaataacgaagatggcagtaggacgact gcgaaagatggtccattagatggacgtatgggtcctaatgaaaaaggtcgaagatgtctt acttgtggagaagaacctgcgaaatgtgtcggtcattacggtttcatcaaactcgctctc cctgtttttcacattggttattttcgtcctaccatcaatatgctttcttgtatttgtaaa acctgctctcgaatacttctacctcgacaagaacgagaaactttcctacgacgttttaga catgccaacatcgactcaagacaaaggacgagtgcgaataaatccgtcttgactttatgt aagaaacaaaacatttgtgctcattgtggtgctgccaatggaccggtcaagaaagtagga gctatgaaaatcgttcacgaaccttttagagcgaagaaaatgggtgcaatgaaagcggat ttcgaatcaaagttcaccaccgccatcgcggacgatataaccttgaaaggcaatcttggg tctgtggtggaggatttgaatcctgtcaaggttttagctctcttccagaggatcacagct gaggactgtgaactgttgtcattgcatcctgaagttggtcgaccagaagattatatctgg agatatgtgtcggtaccacccccggctattcgaccttccgttgcgtcagaatcgggtaat aacgaagatgatttgactgtcaagttggcagagatcgctcattataacaagctactacag ttgactatggagagtgggagaggtattgaacagataatggctaactgggaaaatctcggg caagtggtagctttgtatatcaactcacagactccaggtttgtctgttccggggagcaaa cccaatcggggttttgtccaacgtctcaaaggaaaacaaggtcgattccgaggtaatttg tcgggcaaacgtgttgacttttccggaagaaccgtcatcgggccggatcctaatttacga atagacgaggtagcagttcctgagaaagtggctgtcaaattgtcttaccctgaacgagtg aacaactacaacatcgtagcaatgcgtcaggccatcattcacggtgccaagcttcatccg ggtgcaaacattttggaaagaaaagctccagatggaacaactgttcggacggcgctgcac atgatcaaagatgttgagagacggaccttggtggcgagggaactgaaaattggggatgtg gtacatcgacatgtcagggatggggatatcgcattgttcaaccgacaacctagtttacac aagctatctatcatgtgtcatcgagtacgagtacgaccatggcgaacttttcgactaaac gaatgtgtctgcaacccctacaatgccgatttcgacggtgatgagatgaacttgcacatc cctcaaacggaagaagcccgaactgaagctttggaactgatgagcgtcaagaaaaaccta gtgactcctcgaaatggagaacctatcattgccgccatacaagatttcatcactggttct ttccttctttcccgacgagatcgatttttcagtcgtcaacaattcactcaaatttgttct ttcttctgtgacgcagatttggacattgatatccctccaccaacaatatggaaacctcaa cgtctttggacaggaaaacaaatattcaacgttctcatgaaaccaaatcgtcgttctaga atcaaagtcaatctggaagctaaatgcagaacgatgaaagatcctgatccgaaagatcat ttcccacctgatatgtccccgaatgatggatatttggtcattgtcaatagtgaaatcatg tgtggagtgtttgataagaatacagtaggagatggaaagaagaaatctgtttttggagtt attttacgtgattatggtccggatgaagctgcagcaggaatgaatagactggctaaatta gctgctagatggttggcaaatcaaggtttctcattaggtatcaacgatgttattccagga ccgaaattacatttaagtaaagatggtaaagttgaagaagcttataagtattgtgatgat ttgatagaaaaggcaaaaaaagggttattggagaacgctcctggatgcgatcaagatact actttggaacaacagatttcagggactttatcaaaagttcgtggtgaagttggagagtta tgtatgcaagatcttagtagacataatgctcctttgattatggctacttgtggatctaaa ggctccgtcatcaacgtagctcaaatggtcgcttgtgtaggtcaacaaatcatttctggt aatcgtataccaaacggatttcaagatcgttcgttaccacatttccataaaaaatctaga aatccaccttcgaaaggattcgttcgaaattcattctacacaggcttatctccaactgaa ttcctattccatgctatttctggaagagaaggtttggtcgatacagctgtcaaaactgct gaaactggttatatggccagaaggttgatgaaagctatggaagatttatcaacacattat gatttaagtgttaggaattcagaaggtggagtggtacaattccaatatggtgatgatatg ttagatcctgcttgtttggaaggagatgctactcctgttgattatggtaggacttggaca catgcttcgcgcatcgcatcccgtggtggcagagctttattgccatatgaagtcctcgcc attgctcaacgtattttccccgaaagtgccgaagtcaccgaaccacaaacgaagagaaac agacgtggtagatcaaccaaaaagatagtatcaacggaaatgttgacaggctgggaaagt tgtcatgataaattccgagaaaacactttcgcctttgtcagggataatatcgtcaaggtt atggcagatcaacgtttgtcaagaggattacctcctgcggacacattggaagatgctgaa gagtatggtgatttgcttgttcccgatgatttcgccatcaagcaagtgttggacaatacc aacaaagtctcccaagatcaaatccgaacattccttgaaatatgtcgtatccgttatctt cgatcaaaaattgaaccaggatccacagtaggagctgtcggggctcaatcgattggtgaa ccaggtactcaaatgaccctcaaaacctttcatttcgcaggtgtagcatcaatgaacgtt actctaggagtacctcgaatcaaagaaatcatcaacgcctctaaaacgatcagtacgcct attatcactgctgaacttgtgaacgctacttctgaacatgccgctaggatcgtcaaggga agagttgagaagacggtcttgggtgatatcgcttcggttatcgaagagtcttggagcaat gcgatgggttatataatggtacatattgatttagaggcggtacagaggttgcaattggag ataacgctggatagtataaaagaaagtttgattggatcgaaattgaagttgacccagagt tcattctcattccacaaaggctctagaatccaaatatacccagaagtaagcggtaaagga gataaaactgaaggattgtatgaacgtctcaaagctctcaaaagggcacttccggatgtt caaatcaaaggtttacctcaagctgatagaggggttatcacgaaggatgaaaagaatcag aatatcaataggttgttagttactggatacgggttggccgaggtgatggggactgacggc gtcgacggccgtaggaccaaaacaaatcacgtcatggaaactgcagaagttctaggtata gaagcagctcgtactaccatttataacgagatccaacataccatgcaatcacacggtatg agtatagatcctcgacatgtcatgttattaggggatgtgatgacttacaaaggagaagtt ttaggtataactaggtttggtgtacaaaagatgaaagatagtgttttgatgttggcaagt tttgagaaaactacggatcatttgtttgacgcatcactcttctcgaagaaagatgaaatt caaggtgtatcagaatgtatcatcatgggtactcccgcaccttcttgcggtacttcaatg gcgtctatagtaacacctgctcctttacttccagggagaaaacgtttgttatttgaagat gcttataagaggggacaagaacgaatcaatcgagcgggtatggaatgggagtga

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