Tremella mesenterica: TREMEDRAFT_72477
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Entry
TREMEDRAFT_72477 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14565
nucleolar protein 58
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_72477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_72477
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TREMEDRAFT_72477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
18498743
NCBI-ProteinID:
XP_007008094
JGI:
Treme1_72477
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MLVLAETAIGFVVFKLSSDAKIDSKDLWKEFETPEGANKTLKVQAIQRFTSTASAVEDLS
AVQDGRLTDTLSKFLLDATGGAGEADGEKKKKKKKLEEMLVVSDPKLGSTINKTLSIPVL
SDSTTQDLYRGIRQQLASLLGGVEQKDLNTMSLGLGHSLSRFKLKFSTDKVDTMVIQAIA
LLDDLDKEINIYSMRVKEWYGWHFPEMGKIIVDNLAYARVVKAMGFRTEAATTSFELILP
EELEATLKAAAELSMGTEISESDLAHIHSLCDQVISITEYRTQLSEYLRNRMQAIAPNLT
ALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLV
GQAPQKLKGKMARMVATKAALSIHPQAAEVGITNRVKLESRLRALEHRAGIQGVRKTTVV
ELTGSTPKYNTATDNVPLQNGSGLLPTQPLVPKVEEVITAVKEEKKEKKEKKEKKEKRKS
EIGADTTMEVDGDESKVGETKEEKRARKEAKRAAKAAKKETDVSSTSIIPFNQSNGEEKE
KKSKKRRAESDANALVFNQEEDGEKKKKKKKRESVA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtccttgccgagacggccatcggcttcgtcgtcttcaaactcagctcggacgct
aagattgattccaaagatttgtggaaagaatttgagaccccagagggtgccaacaagacg
ctcaaagttcaagctattcaacgcttcacatcaaccgcttctgccgtagaagacttatca
gccgttcaagatggtcgactcacagacacactttcaaaattccttttggatgctacaggt
ggagccggtgaggcagatggagagaagaagaaaaagaagaagaaactggaagagatgtta
gtcgtatctgatcctaaattaggctcaacgatcaataaaaccctttccataccagttctt
tccgattccaccactcaagatctataccgtggtatccggcaacaactcgcctcactcctc
ggaggcgtggagcagaaagatctcaataccatgtccttaggtcttggacactctttgagc
aggttcaagctcaaattctccactgataaggtggatactatggttatacaggctatcgcg
ctccttgacgatcttgacaaggagatcaatatatattctatgcgtgtaaaggaatggtat
ggatggcatttcccggagatgggaaagatcattgttgataatcttgcatacgctagggtc
gtcaaagccatgggcttccgtacagaagccgccaccacttctttcgaactgatccttcct
gaagaactcgaagctaccctcaaagccgccgccgaactgtccatgggtaccgaaatctcc
gaatctgacctggcgcatatccactccctctgcgatcaagtcatctccattaccgaatac
cgtacacaattatcagaatacctccgtaatcggatgcaggccattgcgccaaatctgacc
gcgctcgtgggtgaattggtaggagccaggttaatcagccacgctggtagtttgatgaac
cttgccaaacatcccgcatccacagtacaaattctgggtgcagaaaaagctttgttcaga
gctttaaagacaaaacatgatacaccaaagtatggtttgatatatcatgcatccctagtc
ggtcaagctcctcagaaattgaaagggaaaatggcacgtatggtagctaccaaagccgct
ctttcaatccaccctcaagcggcagaagtgggaattaccaatcgtgtcaaattagaatct
cgtcttcgagcacttgaacatcgtgctggtattcagggcgtacgcaagacgacggttgtt
gaattaacgggaagtacaccgaaatacaatactgcaactgataatgtacctttgcaaaat
ggttcgggattgttacctactcaaccgttggttccgaaggtagaggaggtgatcactgct
gtcaaagaagagaagaaggagaagaaagaaaagaaagaaaagaaggagaaacggaaatct
gagattggagcggatactacgatggaggtagatggtgatgagagtaaggtaggggaaacg
aaagaggagaaaagggcgaggaaagaagctaaaagagctgcaaaagcagccaagaaagaa
acagacgtatcatcgacatccatcatccccttcaatcaaagtaacggagaggagaaagaa
aagaaatcaaagaaacgtagagcggaatcagatgctaatgctttggttttcaatcaagag
gaagatggggagaagaagaagaaaaagaagaagagagagtcggtggcttga
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