Tremella mesenterica: TREMEDRAFT_72635
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Entry
TREMEDRAFT_72635 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K09191
general transcription factor IIIA
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tms03000
]
TREMEDRAFT_72635
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_72635
Transcription factors [BR:
tms03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
TREMEDRAFT_72635
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
TREMEDRAFT_72635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_8
Mut7-C
Motif
Other DBs
NCBI-GeneID:
18498782
NCBI-ProteinID:
XP_007002107
JGI:
Treme1_72635
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MAMILITTVKMTSISHTSREFDKLYQLDTQYEPIAGPSRSRSRATTPKTPKSPKSPSSRP
PSRTERRFVCSHQGCGKAYFKPSRLAEHELSHTGERPHLCPECGQTYLRTSHLHAHMRTH
LDPETKPFRCDREGCGKTFWTGTHLRRHEEAHDSVQTFTCDKCTQTFNKAHHLREHSLCH
LPPGTKPFQCTQNGCGASFSMKAHLKAHEKTHDATRYTCSHPSHVIFPSFPTWSSLQSHL
HSAHPPTCPYDQCGGRIFKNHQRLRDHLKVHEQQTLDLGNLVPIPTSQTLSTRADHVDDS
SVVKESRRQKRKRLLRESGTDRGVEVEVNDMVDEEGKGKKLKRIESGQEGKEWECEAEGC
TKKFKTKFALQTHNRAVHQAKRFICPNECGTSYSHMSNLTRHILSEHPTSSTVPTTPIQP
SISGSQIYPSTPPDLSRLLKSSDSTSIPPDFSGKVQISPGIVKMEPSSPTMNNHQNRPSL
YGQDERFIEETSGQEGINSELTKDIDEVSGREDLINSRKKKSKDYINGHENIKVFGVKQM
DRKVKVKNMTQSKQDLLNLFIGPNEENRPYICPHPTFGFDLEQECHQRFWRSYDLSRHLR
SVHGLDLSPEELNRVIILA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatattgatcacgacagtcaaaatgacatccatatcacatacctcgagagag
tttgacaagctgtatcaactagatacccagtatgagcctattgctggtccctctcgctcc
aggtcaagagcaaccacaccgaaaactccaaaatcacccaagtctccttcctcccgacct
ccttcgaggacagaacgtcgattcgtttgttcacatcaaggttgtgggaaggcgtacttc
aagccttctagacttgcagaacatgagttgagtcatacgggagagcgaccacatttatgc
ccagagtgtggtcagacatacctccgtacttcacatctccacgcacatatgcgcactcat
ctggatccggagaccaaaccgttcagatgtgatagagaaggatgtgggaagacgttctgg
acaggaactcatctaagacgacatgaggaggcacatgattccgttcaaacgtttacatgt
gacaaatgtacacagacattcaacaaagctcatcatttaagagaacattccttgtgtcat
ttaccacccggtacgaaacctttccaatgtactcaaaatggatgcggggcttcgttcagt
atgaaagcgcatctaaaggctcatgagaaaacgcatgatgctacgagatacacatgttct
catccctctcacgtcatcttcccctctttccccacttggtcttcccttcaatctcatctt
cattccgctcatcctccgacctgtccatacgaccaatgtggcgggcggatattcaagaat
catcaacgactaagggatcatttgaaggtacatgaacaacaaactctagacttgggcaat
ttggtccctatccctacatctcagactttatcaactagagcggatcatgtggatgactca
tctgtagtcaaggaatcaagacgacagaagagaaaaaggcttttgcgagaatcaggaaca
gacaggggtgtagaagttgaagtgaatgatatggtagatgaggaagggaagggaaagaaa
ttgaagaggattgaaagtggacaagagggaaaagaatgggaatgtgaggcggagggatgt
accaagaagttcaaaaccaaattcgccttgcaaacacataaccgagccgtccatcaagct
aaacgatttatatgtccaaacgaatgcggtacaagttattcccatatgtccaacctcact
cgacatatcctctcagaacatcctacatcttccaccgtacccactactcctatccaaccc
tcgatctctggttcacaaatctatccatcgactcctcccgacttgtccaggcttctcaag
tcatcagattccacatcgatacctcctgacttctctggtaaagtccagatctcccctggt
atagtcaaaatggaaccttcgtctcccactatgaataatcatcaaaaccgaccttcactg
tatgggcaagacgaacgttttattgaagaaacaagtggtcaggagggtataaactccgaa
ttgaccaaagacatagatgaagtatctggtcgtgaggatctgatcaactcaagaaagaag
aaaagtaaagattatataaatggtcatgagaatatcaaagtatttggagtaaaacagatg
gacagaaaagtaaaagttaagaatatgacacagtcaaaacaagatttgttaaatttattc
attggtcctaatgaagaaaatcgaccttatatatgtccacaccctactttcggatttgat
ctagaacaagaatgtcatcaaagattttggagaagttatgatttaagtcgacatcttaga
tctgttcatggattagatttatcaccggaagaattgaatagggtgattatcttagcttga
DBGET
integrated database retrieval system