Tremella mesenterica: TREMEDRAFT_72742
Help
Entry
TREMEDRAFT_72742 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tms
Tremella mesenterica
Pathway
tms03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
TREMEDRAFT_72742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_72742
Enzymes [BR:
tms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
TREMEDRAFT_72742
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
TREMEDRAFT_72742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
18498810
NCBI-ProteinID:
XP_007002135
JGI:
Treme1_72742
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MNSSPPPPSLTLPPPHPSRKFSFEDAQSRPSMYVSLFKEMVDTVLASESYLFTHREVSAL
RYILDLPYEPKYLLIRLLLRRPGKIHSLSSLVAAYASELGEQGVGRGMEALLGPIPISDC
SSQNSTTDRDENQKTMSPKARKRQAVRPWDDISTGMTAAEEEADPDLAEAIRKSMWTLKD
PPLEVITSSPIHIAMDPHLQACGGAVAPHTSSMTLSSSPITALVHDESDMSFSDIMTSVS
AEDLRRFARQRKVPLKATANKEAVMNALTNLASKQTVLIFSGGKGKSSMPKPPAVRSTSC
TAESRLKAQLLPYVGFRVIRLTPEVHNLIRRLNLIFSRIPPTASGSSLMLPSILVTSHKR
RYPDYGPPTRSVIWRDREELLKWEGAAHLEAAIGEALGDDWNEQRSDARRAWKLGQRLSR
TDGAQKAKQIWQTAWPVWQSLVEGARGEAMGSLQVRNSGALAGDRFAAGHVLTRVVYKGA
IALGILHEYDEECKVLRALLRQHRWRRGKRGAWYGRLALILMNHYNASLVEKELKMREAT
QVCIDGLLDEDTHLIFRPSLSRRLGRLEKKLNLPADERHISHAELAKCQMRELSATRVLE
NLGRPKLHPTRSNSTRGASPDVSEDESAIDRGLQQVGKSVWMGTNGEVTVEGWVLEWWER
RGYKGFHSEGSILTTLFGLLMWPILFHPLPGAFETAYQIAPLDLGEDTFATARAELIELR
LMEMSETARAIEMLREADHRERPNGTWAVGISWEYPADDLEEILECLGGAAMTTICRMLC
EEYRHRVSGVPDLIVWDAANKDIRFVEVKGPGDSLSETQKIWIDVLLSAGVAVEVCRVKE
LEAPDQSLRPKKKMKIDAGGTARRRGKARDITSDVGDVETRSGELREGI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcccctccacccccgtctctcacacttcctccaccccatcccagtcgcaaa
ttctccttcgaagatgcccaatctcgtccgtccatgtatgtcagcttgtttaaggagatg
gtcgacacggtcttggcctccgaatcttatctcttcacacatagggaggtatcggcgctt
cggtacatcctagaccttccctacgagccaaaatacctgctgattcgcttattgctacga
cgtccgggcaagatacattcgctttcctccctggtggctgcctatgcgtctgagctcggc
gaacaaggcgtcggccgaggcatggaagctctattaggtcccatcccgatatcggactgt
agcagccagaactcaactaccgatcgtgacgaaaatcaaaagaccatgtcaccgaaagca
cgaaagagacaggcagttcgtccatgggatgatatatctactggtatgacagcagccgag
gaggaagccgatccagatctcgccgaggccatacggaagagcatgtggacattgaaggat
ccgcctctcgaagtcattacgtcgagcccaatccacattgcgatggatccccatctgcag
gcttgtggaggcgcagtcgccccacatacctcctccatgaccctgtcttcttcgcctatc
accgcactagttcacgacgaaagcgacatgtcctttagcgacatcatgacaagtgtctcg
gcagaggatctccgtcgtttcgctcgacaacgcaaggtgcccctgaaagcgacggccaac
aaggaggccgtcatgaatgctctcacgaacctagcttctaagcaaacagtactcatattc
tccggaggaaagggcaaaagcagtatgccgaagccacctgcagtacgctctacgtcttgc
accgcagagagtcgcttgaaggcccaactgcttccgtatgtaggatttcgcgtcattcga
ctcacacccgaagtacataatctcatccgacgtctgaaccttatcttctctcgcatcccc
ccgactgcatctggctcctccctcatgctcccttccatacttgtcacgtcccataagcga
cgctatccagattacgggcctcctacgcggtccgttatatggcgtgacagagaagaattg
ctgaaatgggaaggagccgcacatctggaggcggccatcggggaagcccttggtgacgac
tggaacgagcagagaagcgatgctcgaagggcttggaagctcggccagcggctgagtcga
actgatggcgctcaaaaagccaagcaaatatggcaaacagcttggcctgtctggcagtca
ctggttgaaggagcgagaggcgaagcaatgggatcgcttcaggttcgaaattctggagcc
cttgctggagatcgtttcgccgcaggtcatgttctcacaagagtcgtatacaaaggtgcc
atcgcgctcggaatccttcacgaatacgatgaagagtgcaaggttttacgtgccttgctc
agacagcatcgttggcgacgcggaaagagaggagcctggtacgggagactcgcgcttata
ttgatgaatcactacaatgccagtcttgtagaaaaagagctcaagatgcgcgaggcaacc
caagtctgcattgatggtcttctggatgaggacactcatctgatcttccggccctctctc
agccgacgcctcggtaggttagaaaagaaactgaatttgcctgccgatgaacgccacata
tctcatgctgagctggcgaagtgtcagatgagggaactgtcggcgacgcgtgtcttggag
aatctcggtcgtccaaagctacacccgactcgcagtaactcgaccagaggggcgagcccg
gatgtgagcgaagatgagtcggccattgaccgagggctgcaacaagttggaaagagcgtc
tggatggggactaatggcgaggttacggtcgagggctgggtcttggagtggtgggagcga
cgggggtacaaggggttccactccgaagggtccattctcaccacgctgttcgggttgttg
atgtggcccatactgttccatcctctgcccggtgcgttcgagacggcgtatcaaatagct
cctctggatctgggcgaagacacttttgcgaccgcccgagcagagcttatcgagttacgt
cttatggaaatgagcgagacggcccgggccattgagatgcttcgcgaagcggatcaccga
gaacggcctaacggcacctgggccgttggtatctcgtgggaatatccagcggacgatctc
gaggagatcctggaatgccttggcggggctgccatgacgacgatatgtcgaatgctatgc
gaggagtacagacacagggtgtccggggtgcctgacttaattgtttgggacgctgccaat
aaggatatcagatttgtcgaggtcaaggggccgggagacagtctgagcgagacacagaaa
atatggatcgatgttcttctttcagccggcgtggcagtcgaagtgtgccgcgtgaaggag
ctggaggctccggatcagtcgttgagaccgaagaagaagatgaagatagatgcggggggg
acggcgaggagacgtggtaaggcacgagacatcacatctgacgtgggagatgttgagact
cgaagcggcgagctgcgagaggggatatga
DBGET
integrated database retrieval system
