Tremella mesenterica: TREMEDRAFT_72934
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Entry
TREMEDRAFT_72934 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12197
charged multivesicular body protein 1
Organism
tms
Tremella mesenterica
Pathway
tms03272
Virion - Hepatitis viruses
tms04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
TREMEDRAFT_72934
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TREMEDRAFT_72934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_72934
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_72934
Membrane trafficking [BR:
tms04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
TREMEDRAFT_72934
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TREMEDRAFT_72934
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_72934
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_72934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Ist1
SYCE1
GCH_III
FAM117
DUF5798
FKBP_C
Motif
Other DBs
NCBI-GeneID:
18498852
NCBI-ProteinID:
XP_007002177
JGI:
Treme1_72934
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MSHLEKSLFQLKFTAKSLQRQAKKANKDEATEKNKLKQALQKGNTDGARIYAQNAIRKKT
EGLNLLRLASRIDAVASRVETAVTMRTVTNSMGQVVKGMDKAMESMNLERISMVMDKFES
QFADLDVQTGYMESTMSDTTALTTPQDQVDALINRVADEAGLEIRQGLGEAQVPEAAPAQ
TQSEAPLEEDGRLAERLRALRPAV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatctagagaaatcactctttcagctcaaattcaccgccaaatctctacagaga
caagctaagaaggctaataaggatgaagcgacagagaagaataagttaaagcaggccttg
caaaaaggaaacacggacggtgcccgtatatacgctcaaaatgctatcagaaagaaaaca
gaaggactcaatttacttcgactcgcttcacggatcgacgccgtggcttcacgagtagag
acggctgtgacgatgaggacggtcaccaacagtatgggtcaggtggtcaagggtatggac
aaagctatggagagtatgaacttggaacggatatccatggtgatggacaaattcgaatca
caatttgcggacttggacgttcagacgggatatatggaatcgacgatgagcgatacgaca
gctttgacaacgccgcaagatcaagtggatgctttgataaatagggtcgctgatgaagcc
gggttggaaattcggcaaggtctcggagaggctcaggtacctgaggctgctccagcgcag
acacaatcagaagcccctttggaagaggatggtcgattagccgagcgattgagagcctta
cgacctgcagtgtag
DBGET
integrated database retrieval system
