Tremella mesenterica: TREMEDRAFT_73043
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Entry
TREMEDRAFT_73043 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_73043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_73043
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TREMEDRAFT_73043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
18498873
NCBI-ProteinID:
XP_007002198
JGI:
Treme1_73043
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MAFGDRGGDRGGRGGRGGRGGSRGGFGGRGGGRGGGPGDRGGFGGRGGGRGAPRGGGRGA
PRGRGGPAGRGGRPGLGRKGPGAVTIEPHKHSGVYIAKGKEHLLVTRNMTPGESVYGEKR
ISVAVTNSEGEEEKVEYRVWNPFRSKLAAGILGGLDDIHIKPGAKVLYLGAASGSSVSHV
SDIVGPEGVVYAVEFSHRSGRDLIGMAKKRTNVIPIVEDARHPQKYRMLVQMVDVIFADV
AQPDQARIIALNAHHFLKNGGAIVISIKANCIDSTAPAAQVFANEVNIMRKEGIRPKEQL
TLEPYERDHAIVVGRYERHAVN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcatttggcgatcgaggtggtgacagaggtggtagagggggtagaggaggtagggga
ggttcccgtggtggattcggtggacgtggtggtggtcgaggtggtggaccgggtgataga
ggaggtttcggtggtagaggtggtggtcgtggtgcacctagaggtggtggtcgtggcgcc
cctcgtggacgtggtggtccagctggaagaggtggtagaccaggtttaggtcgtaaaggt
ccaggagcagttacaatcgaacctcataaacattccggtgtttatatcgctaaaggaaaa
gaacatttattagtcactaggaatatgacacctggtgaaagtgtttacggagagaaaagg
atcagtgtagctgtgaccaattcagagggagaggaagaaaaagtggaatacagggtatgg
aatcctttcagaagtaaattggcagctggtattttaggtggtttggatgacatccacatc
aaacctggtgctaaagttttataccttggtgctgcttctggttcttcagtttcacacgta
tcggatatcgtaggacctgaaggtgttgtgtatgctgttgaattttctcatcgatctgga
cgtgatcttattggtatggcaaagaaacgtaccaatgttattcccatcgttgaagacgct
cgtcatcctcaaaaataccgcatgctggtacaaatggtagatgtcatcttcgccgatgtc
gctcaacccgatcaagctaggatcatagctctcaacgctcatcatttcctcaagaacgga
ggtgctatagtcatttccatcaaggcgaactgtatcgattctacagcccctgccgctcaa
gtgtttgcgaatgaagttaatatcatgcgtaaggaaggtataaggcctaaagaacaattg
accctcgaaccgtacgaaagagatcacgccatcgtggtcggaaggtacgaacgacacgcc
gtcaattaa
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