Tremella mesenterica: TREMEDRAFT_73071
Help
Entry
TREMEDRAFT_73071 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_73071
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TREMEDRAFT_73071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf-CCCH_10
zf-CCCH_2
zf_CCCH_4
DUF5778
Motif
Other DBs
NCBI-GeneID:
18498885
NCBI-ProteinID:
XP_007002210
JGI:
Treme1_73071
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSTQVCRDYLSGSCRFGNSCRYYHPPRSGQGGRNVSSANSVPLGRRASSEEPTYQFNEDT
LKADLKTELPTWILSSYGAAKYEPNLFAGMDMSQEEMRWKCVQAVKRGTPQEYFKEEADL
LNQARKTIDQATSNLRKTRELAEKLHDARYPSGTKVGGNRPTEFSESTVLAKISGTPTGG
FNPPTIPNAFNRPSTTAFGSSTPSAFGPTAPAAPKAFGTSGSTFGTSSFGQPAFGTSSSP
SSAFVASPAPTTSAFGPSSGGSAFGTSAFGAKTTTSAFGSTTNSTQPSTSGFGSFNTSTT
AFGAPQTTTMTPFSSNPSSNPTITSTAPAFGTSAFGKPANLSNNASPAFGSSGFGSSTPS
AGSAFGQPAFGSSSSPASGGFGAFGKTTTTPTASAFSAFSSPSTSTATQPSSAFGTSAFG
QVKQSAFGSTTSNATTATSAFTPNPFSATTTSAFSTPPSSNPFTKTTPNPFAPRTSSSTP
AFSADVKIPPGWSYDDPWSWTLESLEIDEEGKGGEEDEMWKLPEWDSFDQIPVNPPPRGV
RT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccaagtatgtcgagattacctctcggggtcttgtcgatttggcaacagttgt
cgatattatcatccacctcgaagtggccaagggggaagaaacgttagttcagcaaattct
gtacctcttggtcgaagagccagctctgaggaaccaacgtatcagttcaatgaggacacg
ctaaaagccgatctgaaaacggaactgccaacatggattttatcatcctacggagcggca
aagtacgaaccgaatttgttcgctgggatggatatgagtcaagaggagatgagatggaaa
tgcgttcaagctgtcaaaagaggtactcctcaagaatactttaaagaagaagcagaccta
ctgaatcaggctagaaagacgatagatcaagccacctccaaccttcgcaaaacgcgtgaa
ctggctgagaagttacacgacgctcgatatccttctggaacaaaagtgggtggtaatcgt
cccaccgaattttccgaatctaccgttctggccaaaatctcaggaactcccaccggtgga
ttcaacccacccaccatccccaacgcgttcaatcgtccttctacgacagctttcggatct
tcgacaccttcggcttttggacccaccgctcccgcagctcctaaggcgttcgggacttcg
ggaagtacgttcggcacatcttcctttggtcaaccagcattcggtacctcttcttctccg
tcttcagcctttgtcgcttctcccgctcccactacttcagccttcggtccttcttcaggt
ggatccgcttttggtacgtccgcctttggtgcaaagacaactacttcggctttcggatcc
actaccaactcgacacaaccatctacatctggatttggttcgtttaatacatccaccact
gcttttggtgcacctcaaacaactacaatgacaccattcagttcgaacccttcttcaaac
cccaccatcacctccactgcacctgcgttcggcacctcagcttttggcaaacctgcaaat
ctgtcaaataatgcctctccagcctttggtagctccggtttcggttcttccacaccttcc
gctggctcggcatttggtcagccagcttttggatcaagtagttctccagcctcaggaggt
tttggtgcatttgggaaaacgacaacgactcccactgcatctgctttcagcgctttctca
tctccttccacctctaccgcgacccagccatcgtcagcttttggaacttcggcattcggt
caagtcaaacaatctgctttcggctcgactacttccaacgcaacaaccgcgacttccgcc
ttcacacccaatcctttctccgcaaccaccacctcagcattttccacgcctccttcttcg
aacccttttaccaagaccacaccaaatccattcgcgccaagaacctcttcctcaacacct
gctttcagtgcggatgtcaagataccccccggatggtcatatgacgatccttggagttgg
acgttggagtctctggaaattgacgaagaagggaagggaggggaagaggatgaaatgtgg
aagcttccagagtgggattcattcgatcagatccctgtgaaccctccccctagaggtgtg
agaacataa
DBGET
integrated database retrieval system