KEGG   Tremella mesenterica: TREMEDRAFT_73071
Entry
TREMEDRAFT_73071  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K18716  nucleoporin NUP42
Organism
tms  Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:tms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_73071
Messenger RNA biogenesis [BR:tms03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     TREMEDRAFT_73071
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH zf-CCCH_10 zf-CCCH_2 zf_CCCH_4 DUF5778
Other DBs
NCBI-GeneID: 18498885
NCBI-ProteinID: XP_007002210
JGI: Treme1_73071
LinkDB
Position
Unknown
AA seq 542 aa
MSTQVCRDYLSGSCRFGNSCRYYHPPRSGQGGRNVSSANSVPLGRRASSEEPTYQFNEDT
LKADLKTELPTWILSSYGAAKYEPNLFAGMDMSQEEMRWKCVQAVKRGTPQEYFKEEADL
LNQARKTIDQATSNLRKTRELAEKLHDARYPSGTKVGGNRPTEFSESTVLAKISGTPTGG
FNPPTIPNAFNRPSTTAFGSSTPSAFGPTAPAAPKAFGTSGSTFGTSSFGQPAFGTSSSP
SSAFVASPAPTTSAFGPSSGGSAFGTSAFGAKTTTSAFGSTTNSTQPSTSGFGSFNTSTT
AFGAPQTTTMTPFSSNPSSNPTITSTAPAFGTSAFGKPANLSNNASPAFGSSGFGSSTPS
AGSAFGQPAFGSSSSPASGGFGAFGKTTTTPTASAFSAFSSPSTSTATQPSSAFGTSAFG
QVKQSAFGSTTSNATTATSAFTPNPFSATTTSAFSTPPSSNPFTKTTPNPFAPRTSSSTP
AFSADVKIPPGWSYDDPWSWTLESLEIDEEGKGGEEDEMWKLPEWDSFDQIPVNPPPRGV
RT
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgtccacccaagtatgtcgagattacctctcggggtcttgtcgatttggcaacagttgt
cgatattatcatccacctcgaagtggccaagggggaagaaacgttagttcagcaaattct
gtacctcttggtcgaagagccagctctgaggaaccaacgtatcagttcaatgaggacacg
ctaaaagccgatctgaaaacggaactgccaacatggattttatcatcctacggagcggca
aagtacgaaccgaatttgttcgctgggatggatatgagtcaagaggagatgagatggaaa
tgcgttcaagctgtcaaaagaggtactcctcaagaatactttaaagaagaagcagaccta
ctgaatcaggctagaaagacgatagatcaagccacctccaaccttcgcaaaacgcgtgaa
ctggctgagaagttacacgacgctcgatatccttctggaacaaaagtgggtggtaatcgt
cccaccgaattttccgaatctaccgttctggccaaaatctcaggaactcccaccggtgga
ttcaacccacccaccatccccaacgcgttcaatcgtccttctacgacagctttcggatct
tcgacaccttcggcttttggacccaccgctcccgcagctcctaaggcgttcgggacttcg
ggaagtacgttcggcacatcttcctttggtcaaccagcattcggtacctcttcttctccg
tcttcagcctttgtcgcttctcccgctcccactacttcagccttcggtccttcttcaggt
ggatccgcttttggtacgtccgcctttggtgcaaagacaactacttcggctttcggatcc
actaccaactcgacacaaccatctacatctggatttggttcgtttaatacatccaccact
gcttttggtgcacctcaaacaactacaatgacaccattcagttcgaacccttcttcaaac
cccaccatcacctccactgcacctgcgttcggcacctcagcttttggcaaacctgcaaat
ctgtcaaataatgcctctccagcctttggtagctccggtttcggttcttccacaccttcc
gctggctcggcatttggtcagccagcttttggatcaagtagttctccagcctcaggaggt
tttggtgcatttgggaaaacgacaacgactcccactgcatctgctttcagcgctttctca
tctccttccacctctaccgcgacccagccatcgtcagcttttggaacttcggcattcggt
caagtcaaacaatctgctttcggctcgactacttccaacgcaacaaccgcgacttccgcc
ttcacacccaatcctttctccgcaaccaccacctcagcattttccacgcctccttcttcg
aacccttttaccaagaccacaccaaatccattcgcgccaagaacctcttcctcaacacct
gctttcagtgcggatgtcaagataccccccggatggtcatatgacgatccttggagttgg
acgttggagtctctggaaattgacgaagaagggaagggaggggaagaggatgaaatgtgg
aagcttccagagtgggattcattcgatcagatccctgtgaaccctccccctagaggtgtg
agaacataa

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