Tremella mesenterica: TREMEDRAFT_73329
Help
Entry
TREMEDRAFT_73329 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
tms
Tremella mesenterica
Pathway
tms03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TREMEDRAFT_73329
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tms01002
]
TREMEDRAFT_73329
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_73329
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_73329
Peptidases and inhibitors [BR:
tms01002
]
Metallo peptidases
Family M1
TREMEDRAFT_73329
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TREMEDRAFT_73329
Coactivators
SAGA/TFTC/STAGA complex
TREMEDRAFT_73329
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
TREMEDRAFT_73329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-C2H2_jaz
HEAT_2
Motif
Other DBs
NCBI-GeneID:
18498944
NCBI-ProteinID:
XP_007003135
JGI:
Treme1_73329
LinkDB
All DBs
Position
Unknown
AA seq
2067 aa
AA seq
DB search
MGKKKRHQVFVLKPWCWYCEREFEDDKVLLQHQKSKHFKCQLCPRKLNTAGGLMVHSQQV
HKCDPEPLTNTLPGRDGFDVEIFGMEGVPSNAQAEWKARKEAEAGAAALVAASTAQRPRH
SYTVIPEADLMIALAQHKALMATRNKPVKSISTPMTQPPMVTAPNGAPIPFPMALPGMPP
PTLPVGMPGFPPPPGFIPPFPMVVPPYPGIPGAGPVPTPPGAGTGVSPIPGPLRFTIDQA
GTGNFTPIPGHTQPYPQTITPMQPGAQTPMPAAASATPAPAPSIAVNEIPTIQPPKDGVM
WPDATASPAEKRAQQSRYRYTSPTPDGGEAAMAGRKRKAAADFLQWPLATGPYQLILDHV
GRGLCSQQGIHPISLPLHPRREAADQTRFIKRLFSILTLLVSFGYVSPPSRLFNILLIHQ
GTAYLTVKPTSPSLRTIYLNASPLLEISSVLLSSPTDKDPLLPTPATYAFCNPFQPLPNR
DPPVEISSHPEIKRRTWAATGEGDEGELAISVSGGWVRIVQVGDHSDLGVIQIQIDYSLT
LGGKVVEGIVFERDEIPHMFLSPTTYDAARVWTPCVDNLWERSTWEFEFIVPSFLEGGED
SPVMVVSSGELQEQVTHPHNPHKTIFHYLQTNICSVQQISFAAGPFELVTIVPGQRPVLG
FCLPGDMELMLNTTSFLPRAMEYYTTEFGTYPLSDFKIVFVTGPRIQCSTAATIAVISSD
LLHPFSVIDEAVTARETLSLSLIQQWVGINIIPKTVADTWLINGLALYLRGLFLRHLLGN
NEYRYRLKKDIDKCARLDQGDHMPLCVPGTLDLHDLEFVNLKAPLVLHILDRNLVKAGTS
VGLTRVVPRIFLTAFSDDLPGNMLSTSLFFRTCRKVSSIDLTAFQDLWVYGSGCPNFKLQ
ANFIRKKFLIELSVQQSQPAVKPSKIDKRPTKMFEGTLAVRIHEADGAPFEHLLDIKVPS
KQFSLPFNTKYKRTRRSGHIAARYSKLREDLAAAETDADKDEAAKLRDADRAEVFAYPPW
DDDAERERWRVAEWTDDEVEAMMGEGGGYEWIRFDPECEWIATFDFAEKPWYWISQLQGD
RDVIAQVEAIQNLTMYPSPVVASELARTILVKNYFYRVRMEAAKALTVYNTSECDYIGHF
LLVKLYRALFCLPGDDDAPIRPKRNDFSDVADYLSLVSSLADLRDPATRNTRRDVRRLLL
DLIRYNDNTGNLFDDSTMRATYITALGNAFSLPAWNAEEVDRVMFDEANEAVDRAITMDR
LAPSFHNSVTIAGLLAQMKMILGGKRTNDPRNFLSYTREGNFEPVRLTAFDCLLLCRRPG
RSSATDTYLAEVIKSDSSLTVRRHVARGLSESILMALAVNEIKANVPAGVQEMNNESARE
QSAEKMFKPFVDAVRDEYETREDVKHRLKDLLIDDFAGLDQDVRLALIKMCEIIGKSVKE
RPPGPTITLSTPVVETPAIVTPRIRLSIGGPDVKTEDYGFPASKPTITLPLQQNKKKGKV
LKSQSQGLPETDLKAIENALQKLNAHRSSYLFRQPVDPIRENVPTYLDIIRKPMDLSTIR
ARLDNGMYTKRTDFVEDVKLIISNCYTFNGKASPVGKVCQDFEAHFNKLWSRTEATLSSA
SAGSTPSITPLAPPLIIQPYAPSVKSEHPKAEGIKLTVKPPRPPQSHPPVLPMAPPPVPV
KKRTSEHLAVKFQTPPGRPPKESKPRKPVGSTEIDDLLGQEVDAMEQRPSIHPSPTISFV
KPTTTMKPPPIITLKPSLNTSSSSSSSSDEPKMKKAKITTKSSPEKTPQTHTTLHTPPLS
SPIIPKAPKQKPVPPLPPPPPPAVDVPGALLPIATRQKPPSNLPQTVGNPMPFRLKRAKA
LLAALKKPQEALIFARPVNPIADGCPTYLDEIKEPMDLGTITKKMDGRQYTTMGALAYDI
ELVFNNCWQFNPPGPITVCADTLERVYWQEWSRVVNPKMTADERKAMSALLAKSMKEQLS
LFFREPVDPVALQIPNYFEIIPPEDARDLSTIKSNVEKGKYATARDVDEDVELMLENARV
FNGDGIVVEQANAFGRWWRAQRNKSDL
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaagaaacgtcatcaagtattcgttctcaaaccttggtgctggtattgtgaa
cgtgaattcgaagatgataaagtacttttacaacatcaaaaatcgaaacatttcaaatgt
caattatgtccaaggaagttgaataccgctggaggtttgatggtccattctcagcaggta
cataaatgtgatcctgaacccctcacaaacactctccccggtcgcgatggtttcgacgtc
gagatctttggtatggaaggtgttccttcgaacgctcaagccgaatggaaagcacgaaaa
gaagcagaagcaggagctgccgcattggtagctgcatcaactgctcaacgaccgagacat
tcatataccgtcatacccgaagctgatctcatgatcgctttggctcaacataaagctttg
atggcgacgcggaataaacctgttaaatcgatatccacaccaatgacacaacctccaatg
gtcacagcacccaatggtgctcctataccttttcccatggcattgccaggaatgccacca
cccactttaccagtcggtatgcctgggttccctccacctccaggattcattccccctttt
cctatggtcgtccctccttatcctggtatacctggtgcaggacccgtacccacaccacca
ggtgccggtactggagtttctccgattcctggtccattacgattcaccattgatcaagct
ggtactggaaactttacgccgatcccaggtcatacgcaaccttatccacagaccatcaca
cctatgcaaccaggtgctcagacaccgatgccagccgcagcatccgctacgcctgcccct
gcaccaagtatcgcagtcaatgaaataccgactatacagccaccaaaagatggggtcatg
tggcccgatgcaactgcttctcctgcggagaaaagagctcagcagtcaagatacagatat
acctcacccacgccggatggaggggaggctgctatggcgggaaggaagagaaaggcagcg
gctgactttcttcaatggccattggccaccgggccataccagctcatccttgaccatgtc
ggacgaggtctttgctcccaacaggggattcaccctataagtttacctcttcatccacgt
cgtgaagctgctgaccaaacacgattcatcaaaaggttgttctcgatattgactttgctg
gtgtccttcgggtacgtctcacctccgtctcgtctcttcaacatattgttgatccatcag
ggtacagcttatctcactgtcaaacctaccagtccctctcttcgtactatatacctcaac
gcgtctcctcttctggagatctcatccgtcctattatcctccccaacagacaaggacccc
ctcttacccactccagcaacatacgcattttgcaatccctttcaacctctccctaatcgt
gatcctccagtagaaatctcttcacatccagagatcaaacgtcgaacatgggctgctacc
ggtgaaggtgatgagggcgagcttgccatatcggtctctggcggatgggtacggatcgtt
caagttggagatcactcggatctgggtgtgatacaaattcagattgattacagcttaaca
ttaggaggaaaagtagtggaaggtatcgtatttgaacgtgatgagattcctcacatgttt
ctttctcctactacatatgacgcagccagagtgtggacaccatgtgtggataatttgtgg
gaaaggtcgacttgggaattcgaattcattgtaccttcttttcttgaaggtggtgaagac
tctcctgtgatggtcgtcagcagtggagaacttcaagaacaagttacacatcctcataat
cctcacaaaaccatctttcactatttacaaactaatatctgttcagtccaacaaatctct
ttcgctgcaggtccatttgaattagtcaccatagttcctggacaacgaccggtattggga
ttttgtcttccgggggatatggaactcatgctcaacactacgtccttcctacctcgtgcc
atggagtattacactaccgaattcggtacatatcctctgtcagatttcaagatagtcttc
gtcaccggtcccaggatacaatgctcaactgcagctaccatcgccgtcatctctagcgat
ctcctacatcccttttccgtcatcgatgaagctgtaacagctcgagaaactctctccctc
tcattgattcaacaatgggtaggtataaacatcatcccgaaaaccgtagcggacacttgg
ctcattaatggtctagctctgtatctccgaggtttatttctccgccatctattgggaaac
aacgaatatcgttatcggttaaagaaagacatcgacaaatgtgcccgactagaccaagga
gaccacatgccattgtgtgttccgggaactttggacctgcacgacttggagtttgtcaac
ttgaaagccccactggtactccatatcctcgatcggaatcttgtgaaagcaggcacttct
gtcggacttacacgcgtagtacccagaattttcctcactgccttctcagacgacctcccg
gggaatatgctctctacttcactgttcttccgcacttgtcgaaaagtttcgagtatcgat
ctcaccgcttttcaagatttgtgggtgtacggctcaggttgtcccaatttcaaactccag
gcgaatttcatccgaaagaaatttttaatcgaattgtctgtgcaacaaagtcaaccagct
gtcaaacccagcaagatcgataaacgacccacgaagatgttcgagggcactctagccgtt
cgtattcacgaggccgacggagcgccattcgaacacttgttagatataaaggtcccttcg
aagcaattcagtctaccgttcaatacgaaatacaaacgtacacgaagatcgggacatata
gcagctaggtatagcaaattacgagaagacttagctgcagctgagacggacgcagacaag
gatgaagctgctaaattacgagacgcggatagggccgaggtcttcgcttaccctccgtgg
gacgacgacgctgaacgtgagcgatggagagttgcggaatggacagatgacgaagtggag
gctatgatgggggaaggtggaggatacgagtggatccggttcgatccggagtgtgaatgg
atagctacgttcgactttgcggagaaaccttggtattggatctcccaacttcaaggtgac
agggatgtgattgcgcaagttgaggcaatacagaatctgacgatgtatccatcgcccgtc
gttgccagtgaattggcgaggacgatattggtcaaaaattatttctatcgtgtcaggatg
gaagctgccaaagctttaacagtctacaacacttctgaatgtgactacattggtcatttc
cttctcgtgaagctatatcgtgctttgttttgtcttccgggggatgatgatgcacccatc
agacctaagaggaatgatttttccgatgtggccgattatctcagtctcgtttcctccctt
gctgatttgcgggatcctgctactcgtaatactcggcgggatgtccgccgattacttctc
gatttgatcagatataatgataatacaggtaatttgttcgacgattctactatgcgagcg
acctacattacggctttgggtaatgccttcagcctccctgcatggaatgcggaggaagtt
gatcgggtcatgtttgacgaagcgaacgaagctgtcgatcgggctatcacgatggatcgt
cttgctcctagtttccataattccgtgacgattgctggactactggcacaaatgaaaatg
atccttggtggaaaacgcaccaacgatcctcgaaatttcctcagctacacgcgggagggc
aattttgaaccggttcgcttgacggccttcgattgtcttttgctctgtcgtcgtcccggt
cgaagcagtgccactgatacctatctcgctgaagtcataaaatccgattcctccctcaca
gtccgtcgtcatgttgcccgtggactttcagagtcgatcttgatggctctggcggtgaat
gaaatcaaggcgaatgttcccgcgggagtacaagagatgaacaatgagagtgctcgtgag
caaagtgcagagaagatgtttaaaccctttgtcgatgctgtaagggatgaatatgaaacg
cgtgaagacgtgaagcatcgactgaaagaccttctcattgacgattttgctggactcgat
caagatgtcagattagcattaatcaagatgtgtgaaatcataggcaagagtgtcaaagaa
agaccacctggaccaactataactttaagcacaccggttgtcgaaactccagctattgtt
actccccgaattagactgagtataggaggtcctgacgtcaaaacagaagattacggattt
ccagctagcaaaccgacaattacccttcctctacaacaaaacaagaaaaaaggaaaagtt
ctcaaatctcaatctcaaggtttaccagagaccgatctcaaagccatcgaaaatgcttta
caaaagctcaatgcacatcgatcatcgtatcttttccgacaacctgtcgatcctatacga
gaaaatgtccctacgtacttggatatcattcgtaaacccatggacttgtcgaccatcagg
gcaaggttagataatggaatgtataccaaaagaacggattttgtagaggacgtcaagttg
atcatttcgaattgttatactttcaatgggaaggccagtcctgtgggtaaggtttgtcaa
gactttgaagctcactttaataaattatggtcaaggacagaagctacactcagctctgca
tctgcaggcagtactccttccattactcctctagctccccctcttatcatccaaccctat
gcaccatcggtcaaatctgaacacccaaaggcggaaggtatcaaactcaccgtcaaacca
cctcgacctcctcaatctcatccgcctgtcctcccgatggcacctccccctgtcccagtc
aagaaacgtacttccgaacatctcgctgtcaaattccaaacgccacccggtcgaccaccg
aaagaatcgaaacctcgaaaacctgtcgggtctacagagatcgatgatcttcttggtcaa
gaagtggatgctatggaacaacgaccttccatacatccaagtcctaccatatcatttgtc
aaacctaccacaactatgaaacctccccccatcatcacactcaaaccttcccttaataca
tcatcatcatcttcttcttcttccgatgaacctaagatgaagaaagctaagattaccacc
aaatcatccccagagaagacccctcaaactcatactaccctccatactcctccattatct
tctcctatcatacctaaagcgcctaaacagaagcccgttccgcccctaccaccacctccg
ccgcctgctgtggatgtccctggtgcccttctaccgatagcgacgaggcagaaacctcct
tcaaatctgccacaaacggtgggcaacccaatgcctttcaggttgaaaagagcaaaagca
ttgctcgctgcgctgaaaaaacctcaagaagcgctcatcttcgccagaccggtcaatccg
atcgcggatggatgtccgacgtatttggacgagatcaaggagcctatggatctgggaacg
attacgaagaagatggatggaagacaatataccactatgggggctttggcgtatgatatt
gagctggtgtttaataactgctggcaattcaatcctcctggccctatcaccgtctgcgca
gacaccctcgaacgtgtttattggcaagaatggtcccgcgtcgtcaacccgaaaatgact
gcagacgagaggaaagcaatgtcagcattgttggctaaaagtatgaaagaacaattaagc
ttgttcttccgtgagccagtcgatcctgtggctctacaaattcccaattatttcgaaatt
ataccaccggaagacgcacgagatctaagcacgatcaagtcgaatgtcgagaaaggtaaa
tatgcaacggcgagagatgtagacgaagatgtggagctcatgttggaaaatgccagagtt
ttcaatggggatggtatagtggtggaacaggcgaatgcttttggtagatggtggagagct
cagaggaataagtcggacctttga
DBGET
integrated database retrieval system
