Tremella mesenterica: TREMEDRAFT_73911
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Entry
TREMEDRAFT_73911 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tms
Tremella mesenterica
Pathway
tms03015
mRNA surveillance pathway
tms04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TREMEDRAFT_73911
09140 Cellular Processes
09143 Cell growth and death
04113 Meiosis - yeast
TREMEDRAFT_73911
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tms01009
]
TREMEDRAFT_73911
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tms03021
]
TREMEDRAFT_73911
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_73911
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_73911
Enzymes [BR:
tms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
TREMEDRAFT_73911
Protein phosphatases and associated proteins [BR:
tms01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
TREMEDRAFT_73911
Transcription machinery [BR:
tms03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TREMEDRAFT_73911
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TREMEDRAFT_73911
Spliceosome [BR:
tms03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TREMEDRAFT_73911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
18499074
NCBI-ProteinID:
XP_007004856
JGI:
Treme1_73911
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MGNSPSKKIGRTRSKELSPNDIADSIANVTISVPPPNSQSSSSNLADGTPLASVNSFSSL
STPRMNTRRAKTAADRNGSISSISSSRPQSVLDSQSGLAIPPSPSTAPTSPALRSSLLST
SPPPPHSTPGRPSSPPVGSPFVHQSRDSQSSLSPGVALSATVSRGSMSGASAMGIGAMDL
DNMISRLLEAGYSGKVTKSPPLKNAEIANVCAAAREVFLSQPTLIELSPPVKIVGDVHGQ
YADLIRMFEMCGFPPQANYLFLGDYVDRGKQSLETILLLLCYKIKYPENFFLLRGNHECA
NVTRVYGFYDECKRRTNIKTWKTFIDVFNTLPIASIVASKIFCVHGGLSPSLKSMDDIRR
IQRPTDVPDFGLLNDLVWSDPSDTTMDWEDNERGVSYCYGKSVINAFLATHDMDLICRAH
MVVEDGYEFYNDRTLVTVFSAPNYCGEFDNFGAVMSVSEDLLCSFELLKPLDGAALKKEM
TKSKRKSLQNHQSPPNNPMAQSF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactcgccatccaagaagataggtcgaactcgatcaaaggagctttctcccaat
gacattgccgattccatagcaaacgttaccatctctgtccctccccctaactcccaatcc
tcttcttcaaaccttgccgatggaacacctctcgcatctgtcaactctttcagtagtctg
tctacaccacggatgaacactcgaagagccaaaacggctgcggatagaaatggttccatc
tcttcaatcagttcgtcaagacctcaaagtgtattggattctcaaagcggtttggcgata
cctccttccccgtccacagctcctacttctccagcccttcgtagctccttattgagcact
tcacctccaccaccccattcaacccccggaagaccttcatcgccgcctgtaggtagtccc
ttcgttcatcagtcacgagacagtcaatctagtctttcaccaggagtagccctttccgcc
actgttagtagaggtagtatgtcgggagctagtgcgatgggaattggagcgatggatctt
gataatatgataagcaggttgttagaggctggatatagcggcaaagtgactaaaagccct
ccgttgaaaaatgcggagattgcaaatgtatgtgcggcagctagggaggttttccttagt
caaccgactttgatcgaattgagtccaccagtcaaaatcgttggagatgtacatggtcag
tacgcagaccttatccgcatgttcgaaatgtgtggattcccacctcaagcaaactatctt
ttcctaggtgattatgtcgacagaggaaagcaatcactcgagaccatccttttgctgtta
tgttacaagatcaagtacccggaaaacttctttctgctgcgagggaatcatgaatgtgcg
aacgttacgagggtgtatggattttatgacgaatgcaaacgtcgcacaaacatcaaaaca
tggaaaaccttcatagatgtcttcaacacattacccatcgcgtctatagtagcgagcaaa
atattctgcgtgcatggggggttgagtccaagtttgaagagtatggatgatatacggcgg
atccagaggccaacggatgtcccagatttcggtctcttgaatgaccttgtatggtccgac
ccatcggatacgactatggattgggaagataacgaaaggggggtgtcgtattgttacggt
aaaagtgtgatcaacgcctttttggcgacgcatgatatggatctgatctgtcgagcacat
atggttgtagaggatggatacgagttttataatgatcgaacattggtaacggtgttttca
gcgccaaactactgtggcgaattcgacaattttggtgcggtcatgtctgtctctgaagat
ttactttgttccttcgagttgctcaaacctctcgacggagcggcattgaagaaagaaatg
acaaaatcgaagcgaaaatctttgcaaaaccatcaatccccacctaacaaccccatggct
caaagtttttaa
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