Tremella mesenterica: TREMEDRAFT_74259
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Entry
TREMEDRAFT_74259 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
tms
Tremella mesenterica
Pathway
tms03008
Ribosome biogenesis in eukaryotes
tms03013
Nucleocytoplasmic transport
tms03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_74259
03008 Ribosome biogenesis in eukaryotes
TREMEDRAFT_74259
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TREMEDRAFT_74259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_74259
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_74259
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_74259
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_74259
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TREMEDRAFT_74259
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
TREMEDRAFT_74259
Pre-60S particles
TREMEDRAFT_74259
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
TREMEDRAFT_74259
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
TREMEDRAFT_74259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
18499160
NCBI-ProteinID:
XP_007005922
JGI:
Treme1_74259
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MEAVLDFSKELDIGLLDQVVAAFYTGAGAPQQEAQRVLTQFQDHPDSWQRVPGILEASQN
VNTKFIALQILEKLITTRWKSLPAEQTAGIRNFIVQITIEVSSDEGRMRREKGYLNKLNL
VLVQILKQAWPRDWPSFIPEIVASSRTNLSLCENNMIILKLLSEEIFDFSAEQMTQAKTK
ALKQTMCSEFSEIFNLCNEVLEKANKPSLIKATLETLLRFLNWIPLGYIFETQIIDFLVT
RFLEVNEFRNVTLKCLSEIGALNVGPEYNTKFVTLFQVVMTSVNRMVPPNTDMAAAYSSA
DDEDQQLIKNLALFLTNFLQTHLRLIETVEHQDLLINAHLYLIKISTVDDREVFKICLEY
WGKLVAELYEEIQSLPLADINPLMNLNLGGLGGLNGAQGLALNGLQLRKNIYADILSNLR
LVMIEKMVKPEEVLIVENDEGEIVREFMKESDTIVLYKSMREVLVYLTHLDVADTETIMT
DKLSKQIDGSEWSWNNLNTLCWAIGSISGAMRIDEETEKRFLVTVIKDLLGLTEMKRGKD
NKAVCASDIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKC
RRHFVMQQAGEHEPFIDEILRTLHRITVDLLPPQVHTFYEAVGYMISAQPNKPTQERLIE
KLMELPNNAWDNLMQQAASNVDVLGNADNVKIMSNILKTNVSACTSIGSFFLPQLGRIWL
DMLGLYKAVSSIISDQVAQQGLVATKTPKVRSLRTIKKEILKLVETYVKKAEDIDGVNVN
LIPGLLDAILGDYNRNVAAARDAEVLNVMATIVSKLGPLLQPQIAPILDSVFEPTLDMIN
KDFAEFPEHRVGFFKLLRAINLTCFTALLELPPQQFKLIIDSVVWAFKHTMRDIADTGLN
IAFEIVNNFANSPPAIANHFYQQFLLSMLGDVFYVLTDADHKSGYKMQSILLARLISLVE
TGQVQAPLYDPVTIPDPSMTNAIFLKKHITDLLSSAFQHVQPTQIDAFVTLMLEHSSDPM
KFKLTLRDFLISLKEFSGDDNAELYIEEKEEEAAQKAREDREAAMRVPGMLKPAQLDDDA
DL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtgctcgatttctccaaagagctagatattggactgctcgaccaggttgta
gcggctttttacactggggccggtgcacctcaacaagaagcccaaagagttttgacccaa
ttccaggaccatcccgacagctggcagagagtaccaggaattctcgaagcctctcaaaac
gtcaacactaagtttatcgccctccaaatcctagagaaactaatcaccacccgatggaag
tcattaccagcagaacagacagcaggaatacgaaatttcatcgtccaaatcacaatcgag
gtatcttcggatgaaggcagaatgaggagagaaaagggttatctcaacaagctcaacctc
gtccttgttcagatcctcaaacaagcatggccgagagattggccgtctttcatccctgaa
atcgttgcttcatcccggaccaacctctccctttgcgaaaacaacatgattatactcaag
ctcctgtcagaagagatattcgacttttcagctgaacagatgacacaggctaagaccaag
gccctcaaacagacgatgtgttccgagttctcggagattttcaacctctgtaatgaggtt
ttggaaaaggccaacaagcccagtctgatcaaggcgacactggagaccttactgcgattc
ctgaattggattccactgggatacatcttcgaaacacagatcatcgattttcttgtcact
cggttcttggaagtaaatgagttccgaaatgttaccctcaagtgcctgtccgaaattgga
gctctaaatgtgggccccgagtataacaccaaattcgtcaccctgttccaagtcgttatg
accagtgtcaaccgtatggtcccacccaacaccgacatggctgccgcatactcctccgcg
gacgacgaggaccaacaactgatcaagaacttggccctctttctcaccaacttccttcaa
actcacctccgcctcatagaaactgtcgaacatcaggatttactcatcaatgctcacctg
tatcttatcaagatatccaccgtggacgaccgggaagtattcaaaatctgtttggaatat
tggggcaagctcgtcgctgagctgtacgaagagattcaatcgttaccactggccgatatt
aaccctctaatgaacctcaatctgggcggtttgggagggttgaatggggcgcaaggtctt
gctttgaatggcttgcagctgcgaaagaacatatacgcggacattttgtcgaatctgcgt
ctggtgatgatcgagaagatggtcaagcctgaagaagtcctcatcgtcgagaatgacgaa
ggggagatcgtacgagagttcatgaaagagagtgacacaatcgtgctctataaaagtatg
agagaagtcttggtgtacttgacgcatctggatgtggcggacaccgagacaatcatgacg
gacaagttatcgaagcagatcgatggctcagaatggtcatggaacaacttgaacacgctg
tgttgggccatcggctcgatctccggggccatgagaatagacgaggagacggagaagcgt
ttccttgtcaccgtcatcaaagatcttttgggtctgaccgagatgaagcgtggcaaggac
aacaaggcggtttgcgcctccgacatcatgtacatcgtgggacaatatcctagatttctg
aaagctcattggaaattcttgaagaccgtggtgaacaaattgttcgaatttatgcacgaa
acacacgaaggtgtgcaagacatggcgtgtgacacttttatcaaaatcgctcaaaaatgt
cgacgacacttcgtcatgcaacaagcaggggagcacgagccatttatcgatgagattctg
cgaaccctgcatcgaataaccgtcgatttactacctcctcaggttcacactttctatgaa
gctgttggatatatgatctccgctcagcccaataagcccacgcaggaacggctgatcgag
aaactcatggaactgccgaacaatgcctgggacaatctcatgcaacaagcagcgagtaat
gtggatgtcttgggcaacgcggacaatgttaagatcatgtccaacatattgaaaacgaat
gtctcggcgtgtacttccattgggtcatttttcctccctcaattaggccgcatctggctg
gacatgctcggactgtataaagctgtgagcagcatcatcagtgatcaggttgcccaacag
ggattggtcgctaccaagacgccaaaggtacggtcgttgaggaccatcaagaaagaaatc
ttgaaactcgtcgagacctacgtgaaaaaggcggaagacatcgatggggtgaacgtgaat
ctcatacctggtctcctagatgctatcttgggagattacaaccgcaatgtcgcggccgct
agagatgcggaagtgttgaatgtcatggccaccattgtttccaaacttgggcctctgttg
cagccgcaaatcgcccccatactcgactctgtctttgagcctacattggatatgatcaac
aaagactttgccgagttcccagaacaccgcgtcggattctttaaacttctccgggcgatc
aatctgacttgtttcaccgctttactcgaattgccaccacaacagttcaaactgatcatc
gactcggtggtgtgggctttcaaacataccatgcgggatattgccgatacagggttgaat
atcgcattcgaaatagtgaacaactttgccaattctcctcctgcgattgcgaatcatttc
taccagcaattccttctcagtatgctcggtgatgtgttctacgttctcacagatgcagat
cacaagagtggatacaaaatgcaatcaattcttctcgctcgtcttatatccttggtggaa
acgggtcaagtgcaagctccactttacgaccccgtcacgatcccggatccaagtatgaca
aatgccatcttcctcaaaaaacacatcaccgatcttctttccagcgcttttcaacatgta
caacccacacaaatcgacgcattcgtcacactcatgcttgaacattcatctgatcctatg
aagttcaaactcactctacgagactttctcatctcgctcaaagagttttcaggggatgat
aacgccgaattgtacattgaagaaaaggaagaagaagcggcgcagaaagctagagaggat
agagaagcagccatgcgtgtaccgggtatgctcaaacctgcgcaattggacgacgatgcg
gatctgtaa
DBGET
integrated database retrieval system