Tremella mesenterica: TREMEDRAFT_74299
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Entry
TREMEDRAFT_74299 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11790
denticleless
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_74299
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TREMEDRAFT_74299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
18499175
NCBI-ProteinID:
XP_007006246
JGI:
Treme1_74299
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MPRPSTQRQPLGLISPNTLSPTHQRDASKSTPTRQRYTSLGKIHNRGTPSSPRSPIKDKT
PSSSSTKENDINHSKTESFLYGHDPSGEISRNDDDKLGEMGMGMGDWFPSLIRRSAKSSK
SLLNLEKDTREVFESGRSKVWVRRRKRQLVCRMEDTLISLSTELPTTRHPSYLATLATSL
APYNPDISPSLILLPSHHSPTGHARDFSPALGVAFNSIAKSYDSSMARAHGRRRLLAVAG
EEGGVRVVDVDQGLGPHRESRGLWWRAHANAIFDISWSPDDTSIMTTSGDQTTRLHSVEG
PEPRLLATLRGHTSSIKTAVFFDPSRSHVKDTNIIASGGRDGNILIYDLRCRGRIGDEQH
RRRTKARYSLGVPGFSVQDGMNLDPIMIVQAAHGEAGKRGISGRTATRSVTSLVALQAMP
GVLASGGSFDGIVKLWDLRFTPDIKNDSNSSSSCTPLGILPDPTLIPGRRSRSINSLVES
PTTGDLYALCGDSQIHTLRPSAYCQEGDSIAILPQKYSDPSLLVSSFYVKMAVSSDGKYL
ASGSCQGGLMTWQVNPKGCERATRFGDGKKKEVCAVDWGHELLAGTTEDSETRIWRPRWA
VEGGDLIGPIE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtccttcaactcaacgccaacctcttggtctaatatcacccaacaccctctca
ccgactcatcaacgagacgcgtcaaaatccactcctactcgccaaagatacacctctctt
gggaaaatccacaatcgtgggacaccttcttctcctagatcacctataaaagataaaact
ccttcttcttcctctacaaaagagaatgatatcaatcattcgaaaactgaatcctttctt
tacggtcacgatcccagcggagagatcagtcggaatgatgatgataaactcggggagatg
ggaatgggcatgggggattggtttccttcacttataagaaggagtgcaaagagtagtaaa
tctctcttgaatttggagaaagacactagggaagtgttcgaatcagggaggtcgaaagtt
tgggtgagaagaaggaaacgacagcttgtgtgtaggatggaggacactttgatttcatta
tcgactgaactacctacaactcgtcatccttcttacctcgctactctggccacttccctc
gcaccatacaaccccgacatctcaccctctctcatccttctcccttcccaccattctccc
actggacacgcccgagatttttccccagcattaggagtagctttcaactccatcgccaaa
tcttatgattcctccatggctcgggcacatgggagacgacgattattagctgttgcgggg
gaagaaggtggtgtaagggtcgtagatgttgatcagggcttaggaccacatagagaatct
agaggattatggtggagagctcatgcgaatgctattttcgatatcagttggtctcctgat
gacacttctataatgacaacatccggcgatcaaacaaccagattacattctgtcgaagga
cccgaaccgagattattggcaactctacgaggtcatacttcttccatcaaaacagccgtt
ttcttcgacccatcacgatcacatgtaaaagataccaacatcattgcttcaggtggaaga
gacggtaatatcttgatttacgatttgagatgtcgaggtcggatcggtgatgaacaacat
cgacgaagaaccaaagcgaggtattctttgggggtgcctggattttcggtacaggatgga
atgaatttggatcctatcatgattgttcaagctgctcatggtgaggcggggaaacggggt
atctcaggacgtacggcaacacggagtgtgacaagcttggtagctctacaagccatgcct
ggtgtattagcttctggaggttctttcgatgggattgtcaaactctgggatttacgtttc
actccggatatcaagaacgattccaattcctcttcttcttgtacacccttgggaatatta
ccagacccaactttgattcccggtcgaagatcccgatccataaatagtttagtggaatca
cctaccactggcgatttatacgctttatgcggagattctcaaatccacacattacgtcca
tcagcttattgtcaagaaggagattcaatcgccatcttacctcagaaatactcggatcca
tcattactcgtctcgtcattttacgtcaagatggcagtaagttctgatggaaagtattta
gcgagtgggagttgtcaaggtggtttaatgacttggcaagtgaatcctaaaggatgtgaa
agggctacaaggtttggagatgggaagaagaaagaagtttgtgcggtggattggggtcat
gaattattggcaggaactactgaagattccgagacgaggatatggagacctagatgggca
gttgaaggaggagatttgatcggaccgatagagtaa
DBGET
integrated database retrieval system