Tremella mesenterica: TREMEDRAFT_74581
Help
Entry
TREMEDRAFT_74581 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tms03041
]
TREMEDRAFT_74581
03009 Ribosome biogenesis [BR:
tms03009
]
TREMEDRAFT_74581
Spliceosome [BR:
tms03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TREMEDRAFT_74581
Ribosome biogenesis [BR:
tms03009
]
Eukaryotic type
90S particles
RNase
TREMEDRAFT_74581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
18499234
NCBI-ProteinID:
XP_007006947
JGI:
Treme1_74581
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MLVAVQGCSHGSLSSIYASLASYTRSHGRPVDLLLLCGDFQALRSTHDFASLAVPPKYHA
LGTFHEYYSGKRKAPVLTIVIGGNHEASNYMWELYHGGWLAEGIYYLGAGGSVLVNGLRI
VGASGIYKKHDYNKGHFEKVPYDKNTLRSVYHTRQYDILKLMQLPPRSNTIVLSHDWPLT
IPHHGNLPALLRRKPFFADEIRTDTLGSPPLLGLLKRLKPEYWFSAHLHVKFAAVYDHKS
PSNNTTVPVSPHSIKASHPVPPSINVPIPLAPALVAQGSVNGGLPGGGVNPDEITIDEDL
DGEDTPLEGGNPDEIEIDMDEDFSGPKHSNPASIEVSPLEMPTSGEIRYTGNENPDEILL
SEDEIHNEPSDLPNIVSEPKKDVEVGQGSQIPSPGSERLDESVDIVEATRRAGSLSGALG
PVPSELPEDGVVRIEGGGTVIGDGGEEGGSSQTRFLALDKCGPGKDHLQFLDIPTPSSGP
PVLQYDPDWLAITRAFHPYLSTAIRQTLPNMLEIEDMVRNEKQKLDIQGVLIPPSPAQDS
KVEGIVRFSVNEKHFESTQNERDRQMDGNTENEEMPKEHQEADMDERGMAKKEFWAKGLV
EISKVQKFQKTAPAQGEAGGSDDAWYTNPQTEAFCRMLGIENKINPNSPYSPSSVR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcgctgtccaaggttgctctcacggttccctctcgtccatctacgcttccctc
gcttcctacacccggtcacatggtcgtccggtcgacttgttactcctctgtggagacttt
caagcgcttaggtctacacatgattttgcaagcttggcggttccaccgaaataccatgcg
ttggggacttttcatgagtattacagtgggaagaggaaagcgcctgttttgactattgtc
attggtggtaatcacgaagccagtaattatatgtgggaattatatcacggcggatggctg
gcagaggggatttattacctcggagcgggaggaagtgtccttgtgaatggtttgagaata
gttggggcaagtggaatttataaaaaacatgattataacaagggtcattttgagaaagtc
ccctacgacaagaacactctgcggagcgtgtatcatacacggcaatacgatattctcaag
ctcatgcagctcccccctcgttcaaacaccatagtcctgtcacacgattggcccctcacc
attccccaccacggtaatctccccgctttactccgccgcaaaccatttttcgccgatgag
atccgaacagacacattaggttccccaccattattaggacttctgaaacgtctcaaacct
gaatactggttttcggcgcatctgcatgtcaaattcgccgcggtctacgatcataagtct
ccctcaaataacactaccgtccctgtatcccctcattccattaaggcctctcatcccgtg
ccaccatccatcaatgttcccataccactggccccagcgctagtggcccaaggatccgtc
aatgggggtttaccaggtggaggagtgaatccggatgagattaccatagatgaagatcta
gacggcgaagacacccctttggaagggggcaatcccgatgagatcgagatagatatggac
gaggacttctctggtccaaagcactccaatccagcctctatagaagtttcaccactggag
atgcctaccagtggtgaaataagatatacggggaatgaaaatccagatgagatccttctt
tctgaggatgagattcataatgaaccttctgatctccccaacatagtctcagagccgaaa
aaagacgtagaggtcggacaaggatctcaaatcccaagtcctggctcagaacgattggac
gaaagtgtggatatcgttgaagctaccagacgggctgggtctttgtcaggagcgttaggt
cccgtgccttcagagcttcctgaggacggggtcgtcaggattgaaggcggcgggacagtg
attggggatggaggagaagaaggaggaagttcacagactaggtttttagctttggataaa
tgtggacctgggaaggatcatcttcaattcctagacatccctactccctcttccggtcct
ccggtattacaatacgatcccgattggctcgctataacccgcgctttccatccttacctc
tctaccgcaatccgtcaaacgttaccgaacatgttagaaatcgaggatatggtacgaaac
gagaagcaaaagctggatatacaaggtgtcttaattcccccttcccctgctcaagattcg
aaagtggaaggaattgtcagattctcggtgaatgaaaaacatttcgagtcaacccaaaat
gagagagataggcagatggatggaaatactgagaatgaggaaatgccaaaggaacatcag
gaggcggatatggatgaaagaggaatggccaagaaagagttttgggcaaaagggttggtg
gagattagtaaagttcagaaattccaaaagactgctcctgcgcaaggtgaagcaggaggg
tcagatgatgcttggtataccaaccctcaaacagaagctttttgtcgaatgttgggtata
gaaaataagattaatcctaacagtccatattctccttcgagcgtcagatag
DBGET
integrated database retrieval system
