Tremella mesenterica: TREMEDRAFT_74725
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Entry
TREMEDRAFT_74725 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
tms
Tremella mesenterica
Pathway
tms03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TREMEDRAFT_74725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tms03019
]
TREMEDRAFT_74725
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_74725
Messenger RNA biogenesis [BR:
tms03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TREMEDRAFT_74725
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TREMEDRAFT_74725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
18499262
NCBI-ProteinID:
XP_007007661
JGI:
Treme1_74725
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MFNSPAPRHTPRRGGSLAPPSIRRGTPSVFSERDRDRDFPLTPSVRSSRLPPIRRVSPTS
SAGDTIRTARHEVEQYEKVYWSKDATHAVSSAGPLPREVQQLVKGADLVVRPLSGSIDPQ
SGFAFIASSSTCISWNYAKGHGASAPPVISALYHGSNGSEPGMILVSPTGEMRIWESMNL
ALANVDRFQRVELELEQDDFVQKIWEISAFRLNLTSSAGRCVPSVTPLTKSGGIFGRTTA
SIFGSREDREGVVAVTSSAGSVFMMAQRTLQKWALGAEGQKYLQEYDLHDAVGQTLYGNQ
WSPHRVHLELNDLLAFSQEELAVLVSYSDHQSGSGSKRIHNSHAIVLFSIHPKSNALTVD
RIVEVSYLAHPDPRMLDVPRLSIPSGSPIAFIRFADVIVMVSMLPDSPYEDVIVLKESHR
NAFLGVGCRSGSAKHAISPSLIVMPAIGGLLTVEVFEAADEALSQEMTATARLKSKMEQA
VFFGDRSENPLSFDLPAGFKGDPAEAALAVSAEVLASSSPYMPTIFELRPQLSDRLLREK
ELIRFVRSNGLLSMLPQTTRRALSRDAEKIKASIDLWDHQNRLMDHMIPHSPQSLLSDAI
TAYMSRHDSSEDGDVVRLFFRSHLHEIDSLLTTVVSTFRAATSSDSRMDLGPWVEEVNNI
FISVNRAASQLREDEHATYEIDRLRPASELWTAQDALIDSLDGLYSITEGLIRDRTRDLG
SVVDEPPSASSHLRSQQEVQAHLKRQMVDLAAALCTNMEEKMRAAKTREMDKGVDPKLGA
SLAERWAALKPRVIRPLGYQKRTNLLNIIDYSTLVYLCHQPKTTRGQVQLQTYIERFGEV
FAFVLYEYYIEQGQLHALLSQDEVYGHLLTKFFDQYHYPELAWMHHIACKRFGEAAASLH
TVATTSQELVKDHLASSIAKLAAVAEIKTRGPSQTRVDLLSTIDDELELVKVQNDLRESL
RSDSTTKRGSPSIENFVVTNCKGLENRPAFKALFIDLGRRLLEGKALDVEGLIDALTLKD
NHGSSAGDSAVALDRLTKSSEMTQSHLRRDLPEGRKEVALISIWRRVFIQDDWLAIARTA
GRSEKAQRGLQRQTLTYATVRALGEIKDFPSNYIISPLTATQPPLLAEVAARFPERPAGE
IEMLMRDHEDEIRTLQRYMNEAVLEERVKEVVELVREDTASAEDVIGIGGEDGEGDVEM
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactctccagcccctcgacatacgccacgtcgaggtggctcactagcacctcct
tcaatacgacgtggaacgccttccgtgttttcagaacgtgaccgcgatagagacttccct
ctgaccccttctgtcaggagctccaggttacctcctatccgtcgagtttctcctacttct
tcagcgggcgataccatccgtacagctcgtcatgaggtggaacaatatgagaaggtatat
tggagtaaagatgccactcatgcagtttcctctgctggaccgctccctagagaagtgcag
caactcgtcaagggcgctgatctggtagttcgtccattgagtggatctatagaccctcag
tcaggatttgcattcatcgctagttcctcaacttgtatctcttggaattatgccaaggga
catggagcttccgctcctcccgtcatatctgcattgtaccacggatccaatggtagtgaa
ccagggatgattctcgtaagcccaacgggcgagatgaggatatgggagagcatgaactta
gcgttggccaacgtggataggtttcagcgggtcgagctcgagctggaacaagacgatttt
gttcaaaaaatatgggaaatctccgcatttcggttgaatctcacttcgtccgctggtcga
tgtgttccctctgtaacccccttgaccaagtcaggggggatctttggtcgtaccaccgcc
tcaatttttggctccagagaggaccgagaaggtgtagtagctgtgacatcatcggcaggg
agcgtcttcatgatggctcaacgaactctacaaaagtgggcactcggagcggagggacaa
aagtatctacaggaatacgatctgcacgacgccgtcggacaaacgttgtacggtaatcaa
tggtcacctcatcgagtccacttagaactgaacgacctgttagctttcagtcaagaagag
cttgctgttctggtttcatactcagatcaccaatcgggatcaggtagcaagagaatacac
aattcgcacgccattgtcttgttctcaattcatccaaagtccaatgctcttacagtggat
cggatagtcgaagtctcctatctcgctcatcctgacccacgaatgctggacgtgccccgg
ctgtcaataccaagcggaagtcccattgccttcatccgtttcgccgatgtcatagtcatg
gtgtcaatgcttccagactctccatacgaagatgtcatcgttctgaaagagtcccatcga
aacgccttcctcggagtgggatgtcggtcaggatcagcaaaacatgcgatttccccttca
ctcatcgtcatgccagccatcggcgggctattgaccgttgaagtgttcgaggccgcagat
gaagcgttatcgcaggaaatgacagctacggcgaggttaaagtcgaaaatggaacaagcg
gtgttcttcggggatcgttcagagaacccattatcttttgatctacccgctggtttcaaa
ggagatcctgccgaggccgctttggctgtatccgcagaggtgctagcatccagttctccg
tatatgcctacgatattcgagcttcggcctcaactcagtgacagattactgcgagagaag
gagttgatacgttttgttcgaagtaatgggctgttgagtatgctgccgcagaccacccgt
agagcactttccagagacgcagagaagatcaaagcttccatagatctgtgggatcatcag
aaccggctcatggaccacatgatacctcactctccccagtcattgctatccgatgcgatc
accgcctatatgagtcgacatgattcgagcgaggacggagatgtcgttcgtctattcttc
cgatctcatctacatgagattgactcgcttctcaccacggtcgtctctacattccgtgcg
gccacctcttcagactctcggatggacttggggccttgggtggaagaagtgaacaatata
ttcatcagtgtgaaccgcgcggcgtcgcaattgcgggaagacgaacacgcgacatacgag
atcgaccgtcttcgacccgcttccgagctgtggacggcacaagatgcgctcatcgattct
cttgacggcttatactccatcaccgaagggctcatacgtgaccggacccgcgatttgggc
tctgtggtggacgagccaccttctgccagcagtcacctgcgaagtcagcaagaagttcaa
gcccatcttaagagacaaatggtcgatttggccgctgcattgtgtaccaacatggaagag
aagatgcgagctgcaaagacaagggagatggacaaaggtgttgatccgaagctaggtgcc
agtctggctgaacgttgggcagctttgaagccccgagtgatccggcctttagggtatcag
aagcgtacgaacttgctgaacatcatcgactattccaccttggtatacttatgtcatcag
cccaagacgacgagaggacaagtacaacttcaaacttacatcgagagatttggagaagtg
tttgcttttgttctatatgagtattatatcgaacaaggacaattacatgcgcttttatca
caggacgaagtgtatggacacctgctcactaaattctttgaccaatatcactatcctgaa
ttggcttggatgcatcatatagcctgtaagaggttcggagaggccgcggcttcacttcat
accgtagctactacgtcacaggaattggtcaaagatcatctggccagtagcattgcaaag
ctcgcagctgtggccgagatcaaaactcgaggaccatcgcagacacgagtagacctgttg
agcaccatagacgatgaactggagctcgtcaaggttcaaaatgaccttcgagagtcgctc
aggtccgactcaactaccaaacgcggctctccctctatcgagaactttgtcgtgacaaat
tgcaagggcctggaaaaccgaccggcgttcaaagcgctgttcattgacctggggcggaga
ctcctggaggggaaggccctggatgtggaagggttgatagacgctttgacgttgaaggat
aaccatggatcatccgctggggactctgctgtggcactggacaggttgacaaagagctct
gaaatgacacaatcgcacctgcgtcgtgatcttccagagggtcgcaaagaggtggcattg
attagtatatggcgaagggtattcatccaggatgactggttggcaattgccagaacagcg
ggaaggagcgagaaagcccaaaggggtttgcagaggcaaacgctgacttatgcgacagtg
cgagcgctgggggagatcaaagacttcccgtcaaactacatcatctcacccctcacggcc
acacaaccccctttgctcgcagaggtcgctgcgaggttccccgagagaccggctggggag
atcgagatgctcatgagggatcacgaggacgaaatacggacattacagaggtacatgaat
gaagcggtattggaagaaagggtgaaagaagttgtagagttggtaagggaagatacggcg
tccgctgaagatgtgatcgggattgggggagaagatggggaaggagatgtagaaatgtga
DBGET
integrated database retrieval system
