Tremella mesenterica: TREMEDRAFT_74827
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Entry
TREMEDRAFT_74827 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_74827
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_74827
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tms03037
]
TREMEDRAFT_74827
Enzymes [BR:
tms01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TREMEDRAFT_74827
Ubiquitin system [BR:
tms04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TREMEDRAFT_74827
UBL E3 ligases
TREMEDRAFT_74827
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
TREMEDRAFT_74827
Cilium and associated proteins [BR:
tms03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
TREMEDRAFT_74827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-P11
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
18499285
NCBI-ProteinID:
XP_007007984
JGI:
Treme1_74827
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MVRKAFVSDRMYMDEAEGFLLQHALFSPPRAWPPTAPPPVDQSTRLAAGKKKMDWEDQVR
LHPDEPMDLSWSKKEGDDECNKERCVICLMPLRDRTIVGVCGHEFCFECIGVWANQSRRC
PLCSADMAPFLLHDLDAIVPIKFYLPPLPQRRPPTMTLPLSRLPGSGEDPRWGAREKAEL
DELDLQVERRREIYRHELYVKHIASNPTTGFRPNPSPREISDDPLLLARATLFMRRELRV
WSLVDVEYLTTYILSLIKAIDIRSEPAVRLLADTLDTPDNVYPRGAEHFAHELYNFLRSP
FKELRKYDLIAQYDPIPNSPLDKSPLRSISRHSSIPISPSNSFSSHSSLLRSPLSSFESS
YKSQNSSSSSQVGRNQHKRSLSSSSSHKLESHLSNHEPSTRKRNSHSTYHDSPPVSKRQQ
TSPKEWSKHDTFIPPPSPGGRKWDESDSWVDPDYLDYIEVQRQREEERMKRRQAKRDRWQ
VGRMGSVTQNVVEQEKERIELLPSPPRTNMVDVDTTQESTVGILDNVDVNLTRSGGISIK
GASNHVNGQKQKRLTLLERLAKAKSESQGLSNLPSTTSLNSNSNSNVQHDVSHISILDQT
RTQAIEQENQTRTQTIEEDNETDRKPNSRIEEEKVQTKKSLKEMKRSRMKLRLKLENEKA
SYKFKTNQSRAYALRSRLLLSKARRAAKEEDSSLRDLDKVERFKEIRRRLMVLKMMQAET
IVERRARELKAKLMEKRKGKGVGPGTGLGTGLRTGLGLGVEDISRMMMVV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaaggctttcgtgagcgataggatgtacatggacgaagcggaagggttctta
ttacaacacgcactcttctcaccacctagagcatggccacccacagcacctccacccgtc
gaccaatctacacgattagcagctggaaagaagaagatggattgggaagatcaagtcagg
ttacatcctgatgaacctatggatttatcttggtcgaagaaagaaggagatgatgaatgt
aataaagagagatgtgtgatttgtctcatgcctctgagggataggactatagtgggtgtg
tgtggacatgagttttgtttcgaatgcataggagtctgggcgaaccaatcacgtcgttgt
ccattatgttcagccgatatggctccttttcttctccacgatctagacgctatagtacct
atcaaattttacctaccaccattacctcaaagacgtcctcctaccatgactctacctctc
tcccgattaccgggttcgggggaagatcctcgatggggagctagagaaaaggcagaattg
gacgagttggatttacaagtcgaaagacgtagggagatttatagacatgagttgtatgtg
aaacacatagcttcaaaccctacaaccggattccgaccgaatccatccccaagagaaatc
tcagacgacccacttcttctcgcccgagccactttgttcatgcgtcgagaattgcgtgtt
tggtcacttgtagatgtagaatatctcacgacttatatattatctttgataaaagctata
gatatacgttctgaacctgctgttagattattagctgatactctcgacacacctgataat
gtttatcctagaggagcggaacatttcgctcatgaattgtataattttttgagatctcct
tttaaggaattgaggaaatatgatttgatcgctcagtacgacccaatacccaactctcca
ctcgataaatctcctttacgatccatctctagacattcttccatcccaatttcaccttct
aattcattttcatcccattcatcactcttacgttcccctctttcatcatttgaatcttca
tacaaaagtcaaaactcttcctcttcttcacaagttggaagaaatcaacataaacgttcc
ctctcctcttcatcatcacataaacttgaatcccatctctcaaatcatgaaccttccacc
cgaaaacgtaactctcattccacataccatgattctccaccagtttcaaaaagacaacaa
acatcaccgaaagaatggagtaaacacgatacattcatacctcctccatcaccaggagga
aggaaatgggatgagtctgatagttgggtagatcctgattatcttgattatatagaggtt
caacgtcaacgagaagaagaaaggatgaaaagacgacaagccaaaagggacagatggcaa
gtgggaagaatgggatcggttactcaaaatgttgttgaacaagagaaagagagaattgaa
ttgttaccttctccacctcgaacaaatatggttgatgttgatacgacacaagaatctaca
gtgggaattttggataatgtggatgttaatttaacaagatcaggagggataagtataaaa
ggagcttcgaatcatgttaatggacaaaaacaaaaacgtttgactttgttggaaagatta
gctaaagctaaatcggaatctcaaggtttatccaatcttccatctactactagtctcaac
tccaactccaactccaacgtccaacacgacgtatcacacatctccatcttagaccaaaca
agaacccaagctatcgaacaagaaaaccaaacaagaacccagacgatcgaagaagacaac
gaaacagatagaaagccaaactcaagaattgaagaggagaaggtacaaactaagaaaagt
ttgaaagaaatgaagagatcaagaatgaaactaagattgaaattagagaatgaaaaagct
tcatacaaattcaaaaccaatcaatcaagagcatacgcattaagatcaagattattatta
tcaaaagctcgtagagctgcaaaagaggaagattcaagtttgagagatttggataaggta
gaaaggtttaaagaaattagaaggaggttgatggttttgaaaatgatgcaagcagagacg
attgttgagagaagagctagggaattgaaagcgaagttgatggagaaacggaaaggtaag
ggggtgggtcctggaacaggactcggaacggggctcaggacgggacttggattgggggtg
gaggatataagtaggatgatgatggttgtataa
DBGET
integrated database retrieval system
