Thermoanaerobacter mathranii: Tmath_0308
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Entry
Tmath_0308 CDS
T01250
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_0308
Enzymes [BR:
tmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmath_0308
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Tmath_0308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADH60086
LinkDB
All DBs
Position
326170..329631
Genome browser
AA seq
1153 aa
AA seq
DB search
MSIRFIYGRAGTGKTSFCLNDIKRKLSDGKSHPLILFVPEQFTFEAEKYLLDTIEKDEKI
RAQVLSFKTLANRVFTEVGGLTHQHLKSCGRSMLIYKIMEDAQKDLKIYSQASKQQGFIK
KISETITELKRFEVSPDKLLEIAETIDYLGLREKLRDISLIYSKFEENLHQNYIDQEDEL
ALLAEKLEYSSQFEGAEFWIDGFTGFTPKQYRVIEKLLKKASRVNVTLCMDTSCNFSEID
TTDLFYTTKKTEDKLLEICQRNNISYEKPVDLNGGTPKRFRESEELSFLEKHFFSYPYKV
YPSETKDISLFKAVNVYSEVEETARDIIRLVRDKGLRYSEIVVAARDLNRYHKLVKAIFS
QYGIPYFIDLKIEIKNNPIIVFITSLFDIHLKRWSYESVFRYLKTGFANLEIEDISLIEN
YVLANGIKGDKWKEEAWNYRLDYRFDRLTMEEEEKEIIEKVNEIKEKITIPLQGFYKKFS
KSKNVREACGTLYDFLVEMGLPQKIQKLIEKFKEEKEYDTANQYAQVWDIVVDVLDQLVE
VIGGEKVTVEQFAKILSIGFDEYQIGTIPPALDEVLVTSVDRMKSHNAKALYIIGVNDGI
FPASHFDERILTDEDREILTSHDVELDNDTKTKVFEEQFLVYTALTSTSKFLRISYPIAD
HEGKSMRPSIIISRLKKIFPKIKQFNNVVEMDTAEENLNRVSTPSPTFNEMITAIKKWDV
TDKIHPLWLDVYKWYAKNDRWKPGLTRALEGIYYTNQVEKVPAHKMKKLYGDKLRFSVSR
LEKYAACPFAYFVQYGLKARERKIYSFEPPDLGIFMHNILDRFSKALEEEELTWQEVDKE
WCDEAVSIIVDDMIQKIPGYILNSSPRYKFLAERLKRILSNAVWIVSEHIKRSSFKPVDH
EVAFGDNQKYPPIKIGLSNGEEINLIGRIDRIDIFKKEDEAYIRIIDYKSGNKTLDLSDV
FYGLELQLLIYLDAILESAIKEGTTLNPAGVFYFKIDYPIIKADKDMSDEDLQKEIFKRL
RLEGLVLKDEQIIKEMDKSIEGTSYIIPATINKDGSIGKNTKGATKEQFELLRKHVKKTI
QRLTEEMLEGNISISPYKKDKETPCKYCPYSSICQFEKNFKDNDYRVIKTKDVEEIWSML
EQEVKTDGDYVDS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaggtttatatatggaagagcaggtacaggcaagactagcttttgccttaat
gatataaaaagaaaattaagtgatggaaaatcccatcccctcatactttttgttcctgag
cagtttacttttgaggcagaaaaatatcttttagatacaattgaaaaagatgagaagata
agggcgcaagttttaagttttaaaactttggcaaacagggtatttacagaggtagggggt
ctcactcatcaacacctgaaatcatgcggaaggtcaatgcttatttacaaaataatggaa
gacgcgcaaaaagacttaaaaatttattctcaagcctccaagcagcagggttttatcaaa
aaaatttcagaaactataacagagcttaaaagatttgaagtgtcccctgataagttgcta
gagatagctgaaacaatagattatttgggattgagagaaaaactgagggacataagttta
atatattctaaatttgaagagaatttacaccaaaattatatagaccaagaggatgagttg
gctcttttagcagagaaactggaatattcttctcagtttgaaggtgctgaattttggata
gacggttttacaggttttacgccaaagcagtatagggtgatagaaaagcttttaaagaaa
gcttcaagagtaaatgtaactctttgtatggacacatcttgcaatttctctgaaattgat
actacagaccttttttacactactaaaaaaacagaagataagcttttggaaatatgtcag
agaaataatatatcttatgaaaaaccggtggatttaaatggaggaacacctaaaagattc
agagaaagtgaagagctaagctttctagaaaaacactttttttcctatccttacaaagta
tatccaagtgagacaaaggatataagtctttttaaagctgtcaacgtatatagtgaagtt
gaagaaactgcgagagatatcataagactggtgagagataaaggacttaggtactctgag
attgtggtagctgctcgcgatttaaatagatatcataaacttgttaaagctatattttct
caatatggaattccttactttatagacctaaagatagaaataaaaaataatcccatcatt
gtttttataacctccctttttgacattcatttaaaaagatggtcttatgaatctgttttt
aggtacttaaagacaggttttgcaaatttagaaatagaggacataagccttattgaaaat
tatgtacttgccaatggcataaagggagataaatggaaagaggaggcttggaattatagg
ctagattacagattcgacagattgacaatggaggaagaggaaaaagagataatagaaaaa
gtaaatgagataaaagagaaaattacaattccattgcagggtttttataaaaagttttcc
aaatcaaaaaatgttagagaagcttgtggtactttatacgattttctcgttgagatgggg
ttgcctcaaaagattcagaaattgattgaaaaattcaaagaagaaaaggaatatgataca
gcaaatcaatacgcacaggtttgggatattgttgtagatgttttagatcaattggtagaa
gtgatagggggagagaaagttacagtagaacagtttgcgaagatactcagcataggattt
gacgaataccaaattgggactattcctcctgcccttgatgaagtgctggttactagcgtt
gataggatgaaaagccacaatgcaaaagcactttacataatcggtgtaaatgacggtata
tttcctgcttcccattttgatgagagaattcttacagatgaagatagagaaattttaact
tctcacgatgtggagttagacaatgatacaaagactaaagtttttgaagagcaattttta
gtctacactgctttaacttccacaagcaaatttttaaggataagttatcctattgctgac
catgaaggcaaaagcatgagaccttccataataatttcccgtttaaaaaagatttttcca
aaaataaaacaatttaacaacgtggtagaaatggatacagccgaggaaaatttaaatcgc
gtatcaacaccttcacctacttttaatgaaatgataactgcgattaaaaaatgggatgtg
acagataaaatacatcctctgtggttggatgtgtataaatggtatgctaaaaatgatcgt
tggaaaccgggattgacaagagctttagaaggtatttattacactaatcaggtggaaaaa
gtacctgctcataagatgaaaaagttgtacggggataaattacgttttagcgtatccaga
cttgaaaaatacgcagcttgtccttttgcctattttgtccaatacggacttaaagcaaga
gaaagaaaaatatatagttttgagccacctgatttaggaatatttatgcacaatatcctc
gatagattttcaaaagcgttggaggaagaagaacttacatggcaagaggttgataaagag
tggtgtgatgaagccgtatcaataattgttgatgatatgatacaaaaaataccaggttat
attttaaacagcagtcctaggtataagtttcttgctgaaagattaaaaagaatactttct
aatgcggtttggattgtatctgagcatatcaagaggagttcttttaaacctgttgaccat
gaagttgcttttggtgataatcaaaagtatcctcctataaagattggactatcaaatggt
gaagagataaatctcatagggcggatagacagaattgacatatttaaaaaagaggatgaa
gcttatataagaataatagattacaagtctggcaacaaaactttagacctttctgatgtt
ttctatggtttagagcttcaacttttgatatatttggatgccatattggaaagcgcaata
aaagagggtacgactttgaatccggctggtgtgttttactttaaaatagattacccgatt
ataaaggcagataaggatatgtcggatgaagatctgcaaaaagagatttttaaaagatta
agactagaagggcttgttttaaaagatgagcaaattataaaagagatggacaaatcaatt
gaaggcacttcttatataattccagcaacaatcaataaagacgggagcataggcaaaaac
accaaaggagctacaaaagagcagtttgaattgttgagaaaacatgttaaaaaaactata
cagcgattgactgaagaaatgctggaagggaacatctcaatttctccttataaaaaagat
aaagaaactccttgcaaatattgcccttactcttctatctgccaatttgaaaagaatttt
aaagataatgattacagggttataaagactaaagatgttgaagaaatatggagtatgtta
gaacaggaagtgaaaacagatggagactacgtggactcatga
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