Thermoanaerobacter mathranii: Tmath_0310
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Entry
Tmath_0310 CDS
T01250
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_0310
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tmath_0310
Archaeal homologous recombinant proteins
Tmath_0310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF1574
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
ADH60088
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Position
333312..334529
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AA seq
405 aa
AA seq
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MRILHTSDWHLGKSLENFSRMEEQEKFLEDFVQIVEENNVDLVIIAGDVYDSSNPPAKAE
MLFYSTLKRLSSGERVILVIAGNHDNPERLSAASPLAYEHGVILLGTPKSIVHKGDFGKF
KILDSGEGYLEIEIKGEKAVIIALPYPSEKRLNEIFTEEMEEGKRQKSYSERIGEIFKRL
SEKYRDDTINIAVSHIFVSGGEEAGSERPIQLGGSFAVEIRHLPQKAQYIALGHLHRPQK
VSSTLNAYYSGSALQYSKSEINHSKCAYLVDIKAGTSPIVKEVYFKNYKPIEIFKCDNID
EAIEICKEYQDKNIWAYFEIKTDSPLPPSKIKEMKQILPNIVEIKPILPEDEAQVEDYEI
TEKSMLELFEEFYLKERGVTPSQDLIDLFVSIVKEEDEEDETFEA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaggattttacatacatctgattggcatttaggtaaaagccttgaaaacttttcaagg
atggaagagcaggaaaaatttttagaagattttgtgcaaattgtagaagagaacaatgta
gacctagttataattgctggagatgtatacgactcttcaaatcctcctgcgaaggcagag
atgcttttttatagcaccctaaaaaggctttctagtggcgagagagtgattttggttatt
gcaggaaatcatgacaaccctgaaaggctttctgcagcaagtcctcttgcctacgagcac
ggagtgatacttctaggtactcctaaaagtattgttcacaagggagactttggaaaattt
aaaattttagattcgggagagggatacttagaaatagagataaaaggtgaaaaagctgta
attatagcccttccttatcccagtgaaaaaagattaaatgaaattttcacagaggaaatg
gaagaaggtaagaggcaaaaaagttactctgagagaattggagaaatttttaaaaggctt
tctgaaaagtacagggatgacactataaatatagcagtctcccacatttttgtttccgga
ggggaggaggctggttctgaaagacctattcaattagggggaagttttgctgtggaaata
agacatcttccacaaaaagctcagtatatcgcattaggacatcttcatcggccccaaaaa
gtttcttctacactaaacgcctattattcaggttcagcccttcaatacagcaaaagcgag
ataaaccattccaaatgtgcttatttagtagacataaaggctggcacctcccctatagtg
aaagaggtttattttaaaaattacaaacctatagaaatatttaagtgcgacaatattgat
gaagcaattgaaatttgcaaagaataccaagataaaaatatatgggcgtattttgaaata
aagacagattctcctttgccaccttctaagataaaagaaatgaaacaaattttgccgaac
atagttgaaataaaacctattttgccagaagatgaagctcaagtagaagattatgaaata
accgaaaaaagcatgctggaactttttgaagaattttacttaaaagaaagaggagtaact
ccttcacaagaccttatagacctttttgtgagtatagtaaaagaagaggatgaggaagat
gagacctttgaagcttag
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