Thermoanaerobacter mathranii: Tmath_0967
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Entry
Tmath_0967 CDS
T01250
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tmath_0967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_0967
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tmath_0967
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tmath_0967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF6559
Motif
Other DBs
NCBI-ProteinID:
ADH60701
UniProt:
A0ABM5LPV2
LinkDB
All DBs
Position
999344..1000090
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AA seq
248 aa
AA seq
DB search
MRLLKTEAIVLKNNSIGETDKMATLFTKNYGKLRAVAKGARRSKSRFVNAIRPFMVANYV
IFEGQNYYYIDQWELIESHKNIEKDLVKFSVASYISETVNKILEENQKSEKLYQFLKHSF
KAVNELQIDPLIFIVSYNLKLVSLLGYMPQLDNCIVCGKREDLKYFSNSCGGVVCTICKN
KCFDARPLHEVALKAIKYFFKGDYEKLQNIKVSGVIKEEVDKIITAYMKEHLEIELKSKD
FIDKLQNM
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgttaaaaacagaagcaatagtattaaaaaataattcaataggtgaaacagac
aaaatggctaccctttttactaaaaactatggaaaacttcgggcggtagcaaaaggggca
agacgatcaaagagtcgttttgtgaatgcaataaggccttttatggttgccaattatgtt
atttttgaaggacaaaattattactacattgaccaatgggaattaatagaatcccataaa
aatatagaaaaagacttagttaaattttctgtggcgtcgtacatttccgaaactgtaaac
aaaattttagaggaaaatcaaaaaagtgaaaaattatatcaatttttaaaacattctttt
aaagctgttaacgagttacaaatagaccctttaatttttattgtttcttataacttgaaa
ttagtttctttattggggtatatgcctcaacttgataattgtattgtttgtggaaaaaga
gaagatttaaaatatttttctaattcttgcggtggtgtagtgtgtacaatctgcaaaaat
aaatgttttgatgccagaccattgcatgaagtagcattaaaagctataaagtattttttt
aaaggagattatgaaaagcttcaaaatattaaagtttcaggagttataaaagaagaagtg
gataaaataataacagcttatatgaaagaacatttggaaatagagctaaaatcaaaagat
tttattgacaaattacaaaatatgtga
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