Thermoanaerobacter mathranii: Tmath_1235
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Entry
Tmath_1235 CDS
T01250
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmt03016
]
Tmath_1235
Enzymes [BR:
tmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tmath_1235
Transfer RNA biogenesis [BR:
tmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tmath_1235
Prokaryotic type
Tmath_1235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DUF1416
Motif
Other DBs
NCBI-ProteinID:
ADH60950
LinkDB
All DBs
Position
complement(1242715..1243566)
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AA seq
283 aa
AA seq
DB search
MEGILNILKPPGMTSHDVVDFIRKIYNTRKVGHTGTLDPDAAGVLPVCVGGATKFVSYLV
EQDKRYRFEITFGFSTDTLDKSGKIIKSGPVRFLKEKELRQVLREFEGKIKQIPPIYSAK
KIKGKKLYEYAREGKIIDIPPIEVTIYNIDLVEYESPYQVLIDVKCSKGTYVRALVRDIC
EKLNMPGYMSMLIRTEVGAFRIEDAYTLEEIKEKKPSLQPIDKFIKLPSVHLNKIEAEKI
LKGQFISNRHSIETSFLKLYDNNGKFLGIGVSERNKIRPKRLL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttggagggaatactcaacattttaaagccacctggtatgacttctcacgatgttgtagat
tttatcagaaaaatctacaacacacgaaaagttggacatacaggaactttagacccagat
gcagcaggagtactacctgtctgcgtaggaggcgctactaaatttgtctcttacctggta
gaacaagataaaagatatagatttgaaataacttttgggtttagtacagatactttagat
aaaagtggcaaaattataaaaagcggacctgtaagatttttaaaggagaaagaattaagg
caagtcttaagggaatttgaaggaaagataaagcaaattcctccaatatattctgcaaaa
aaaataaaaggaaaaaaattatatgaatatgcgagagaaggaaagataattgatatccca
cctattgaagttactatatacaatattgacttagttgagtatgagtcaccttatcaagtt
ttgatagatgtgaaatgttctaaaggcacctatgtgagagctttagtaagagatatatgc
gaaaaattaaacatgccgggatatatgtctatgttgataagaacagaggttggtgctttt
aggatagaagatgcttatactcttgaagaaataaaagaaaaaaagccttcattacagcca
atagataagtttattaaattaccttctgtacacttaaacaaaatagaagctgaaaaaatt
ttaaaaggtcaatttatttcgaatagacattctattgaaacttcatttttgaaattatat
gataataatggcaagtttctcggtattggagtttcggaaagaaataaaatccgtcccaaa
agacttctttga
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