Thermoanaerobacter mathranii: Tmath_1257
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Entry
Tmath_1257 CDS
T01250
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K02405
RNA polymerase sigma factor FliA
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt02020
Two-component system
tmt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tmath_1257
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmath_1257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmt03021
]
Tmath_1257
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tmt02035
]
Tmath_1257
Transcription machinery [BR:
tmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmath_1257
Bacterial motility proteins [BR:
tmt02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tmath_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
MOZ_SAS
Alpha-E
HTH_23
HTH_37
HTH_Mga
COMPASS-Shg1
HJURP_C
ATP-cone
DUF1599
Motif
Other DBs
NCBI-ProteinID:
ADH60972
UniProt:
D7AP56
LinkDB
All DBs
Position
complement(1263711..1264451)
Genome browser
AA seq
246 aa
AA seq
DB search
MALVEEDIWKTYNSSKDPNLRNEIIIKYMPLVKHIVKKLIISDVTQSEYEDLINQGVLGL
IDAIEKYQPSKGVKFETYATLRIRGEIIDYLRKKDWMPRSLKKKYKKIEETVETLQQKYN
REPTVEEITEACGLNETDVLKTLSYINVSNINSLEEAIENNFKLHAISDVELKNPEEEVL
YKELKRKLANAIKNLPDKERLVITLYYYEDLNYKDISKILNLTESRISQIHTKAIKRIRE
MLGEYF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcattagtggaggaggatatatggaaaacttataattctagtaaagatccaaattta
cgaaatgaaataataatcaagtatatgccacttgtcaaacatattgtcaaaaaactcatt
atttctgatgttactcaatctgagtatgaagacttaataaatcaaggagtacttggcctt
atcgatgcaattgaaaaatatcagcctagtaaaggcgtaaaatttgaaacttacgctact
ttaaggataagaggagaaataatagactatttgcgaaaaaaagattggatgcctcgaagc
cttaaaaaaaaatacaaaaaaatagaagaaaccgtagaaacactgcaacaaaaatataat
agagaacctacagttgaggaaataacagaagcttgtggcttaaatgaaacagatgtttta
aaaactttaagctatatcaatgtttctaacattaactctttagaggaagctattgaaaat
aactttaaattgcatgctatttcagatgttgaattaaaaaatccagaagaagaagtattg
tacaaagaattaaaaagaaagctagcaaatgccattaaaaatttaccagataaagagaga
ctagtaataactttgtattattatgaagatttaaactacaaagatataagcaaaatttta
aatttaacagaatctagaatatcacaaattcacacaaaggctatcaaaaggataagggag
atgttaggcgaatacttttaa
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