Thermoanaerobacter mathranii: Tmath_1293
Help
Entry
Tmath_1293 CDS
T01250
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmt03032
]
Tmath_1293
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_1293
Enzymes [BR:
tmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tmath_1293
DNA replication proteins [BR:
tmt03032
]
Prokaryotic type
DNA Topoisomerases
Tmath_1293
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tmath_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
Zn_ribbon_GRF
Toprim_4
Chordopox_A20R
Zn_ribbon_GRF_2
Zn_ribbon_PaaD
Zn_ribbon_RPB9
DUF1272
Motif
Other DBs
NCBI-ProteinID:
ADH61008
LinkDB
All DBs
Position
complement(1292881..1294962)
Genome browser
AA seq
693 aa
AA seq
DB search
MAKSLVIVESPAKAKTISKFLGKNFKVAASMGHVRDLPKSQLGIDIENNFTPKYITIRGK
GAIIENLKKEAKDADKIFLATDPDREGEAISWHIAQLLNLNIEEPCRIEFHEITKNAVQT
ALKSPRSIDLNLVDAQQARRILDRLVGYKISPLLWKKIKRGLSAGRVQSVAARLICDRER
EIEAFVPEEYWSITAILSDEKNFTKFEAKFYGTKEDKVELKTKEDVDKVLAALSEEYTVD
KIKTGVKKRNPSPPFITSTLQQEASRKLGFTAKKTMLIAQQLYEGVEIKGEGSVGLITYI
RTDSTRVANEAKAEVYKYIVEKFGKEYANPGANYASKKANVQDAHEAIRPTSIYRDPESI
KDSLTPDQYKLYKLVWSRFIASQMAPAIYDTVSMDIVNNGYVFKASGSSIKFLGFMTVYV
EGTDIQEEEEKTVPVLQEGTKLLLKELKPTQHFTQPPPRYTEASLIKELEEKGIGRPSTY
APTISTLLERGYVVKDNKNLKPTELGFIVTDALKEFFTKIVDVKFTAEMEEQLDKIEEGQ
AKWYEVVQEFYNDFYKTLKIAEEQMEEIDIKEEVEVTDIKCEICGRPMVIKKGRYGKFLA
CSGFPECKNTKPLYEKIGVKCPKCGGEIVRKKSKKGRMYYACENAPNCDFILWDKPVEEK
CPVCGSLLIEKNTKNIHILKCSNAECDYQKEVK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctctagttattgtggaatctccagctaaagctaagactatttctaaattt
ttaggcaaaaattttaaagtagcggcctccatgggacatgttagggacttgccaaaaagt
caattaggtatagatattgaaaacaattttacccctaagtacataactatccggggaaaa
ggggctattatagagaatttaaaaaaagaagcaaaggatgcagataaaatttttttggcc
actgaccctgacagagaaggagaagcaatttcctggcatattgctcaattgttaaatttg
aatattgaggagccttgtcgcatagaatttcatgagattacaaaaaatgcagtgcaaact
gctcttaaaagccctcgctctatagatttaaatttggtagatgcgcaacaagctagaaga
attcttgacagattggtaggatataaaataagtcctcttctttggaaaaaaataaagagg
ggattaagcgcagggagagtccaatcagtagcagcacgtttgatttgcgatagagaaaga
gaaatagaagcttttgttccagaagaatattggagcattacggcgattctttctgatgag
aaaaattttaccaagtttgaagcaaaattctatggtactaaagaggataaagttgagtta
aagacaaaagaagatgtagacaaagtattggcagctttatctgaagagtacactgtggat
aaaataaaaacaggtgtcaaaaagaggaatccttctccgccttttataactagtacattg
caacaagaagcttcaaggaaattggggtttactgcaaagaaaactatgttaatcgctcaa
caattatacgaaggagtagaaatcaagggagaaggtagcgtagggcttatcacttatata
aggacagattctacaagggtggcaaatgaagctaaagcggaggtatataaatatatagtt
gaaaagtttggaaaagagtatgccaatccgggagcaaattacgcttctaaaaaggccaat
gttcaggatgctcatgaagctataagacctacttctatttaccgggatcccgagagtata
aaggattccttaacgccagaccaatataaattgtacaaattagtttggagtagattcata
gcaagtcaaatggcacctgcgatttacgatactgtttctatggatatagtaaataatgga
tatgtttttaaagcttctggttctagtataaaatttttagggtttatgacggtatatgta
gaaggaacggatatacaagaagaggaagaaaaaactgtgcctgtgcttcaagaaggaact
aaattgcttttgaaggaattaaaaccaacacaacattttacccagcctccacccagatac
acggaagcttctttgattaaagaattagaggaaaaagggataggccgccccagtacttat
gctcctactatctctactttgttagaaagaggatatgtagtaaaagacaataagaattta
aaacctacagagttaggctttattgtgacagacgcattgaaagagttttttactaaaatt
gtagatgttaaatttactgctgagatggaggagcagctggacaagattgaagaaggccaa
gcgaaatggtatgaagtggtgcaagagttttacaatgatttttataaaactttaaaaatt
gcagaagaacaaatggaagagatagatataaaagaagaagtggaagtgactgatattaaa
tgtgaaatctgcggaagacccatggttataaaaaaaggcagatatggtaaatttcttgct
tgttctggttttcctgaatgcaaaaatacaaaacctttgtatgaaaaaattggtgttaaa
tgccctaaatgtggtggagaaattgtaaggaaaaaaagtaaaaaagggcgaatgtattat
gcttgcgaaaatgcacctaattgcgattttatattgtgggacaaacctgttgaggaaaaa
tgtcctgtttgtggtagcttattaatagaaaaaaatacaaagaatatacatatactaaaa
tgttctaatgcagaatgtgattatcaaaaggaagttaaatga
DBGET
integrated database retrieval system
