Thermoanaerobacter mathranii: Tmath_1364
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Entry
Tmath_1364 CDS
T01250
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tmath_1364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_1364
Enzymes [BR:
tmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmath_1364
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tmath_1364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_Ribbon_TF
Zn_ribbon_6
MarR
TrwB_AAD_bind
Viral_helicase1
ATPase_2
AAA_19
HypA
Motif
Other DBs
NCBI-ProteinID:
ADH61078
LinkDB
All DBs
Position
complement(1357631..1359829)
Genome browser
AA seq
732 aa
AA seq
DB search
MFAEVVVDIKSSNTDRVYTYHIPEGMNVKIGMRVSVPFNNRYIEGYVISITDKASYSVDK
IKDIYRILDSYSIFDEKMIELAKWMRDYYKCYFSEALQTIMPVGIKQGEKKVKVVKINID
EIPFQLSKRAPKQYEILQYLKNRSPIRLSELVKVLNIDYSVIKNLQNKGYIKVYEEEVLR
FNIKDIERTKPLSLTEEQKRAVEEVKKSILTGTFDKYLLFGVTGSGKTEVYLQLIDEAIK
IGKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNGLVDVVVGV
RNAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIQKAVLVMASATPSLE
TYYKANKGEYKLIRLTKRINVSMPKIEVVNMSEELASGNTSIFSRKLFSYIKENLKRREQ
TILFLNRRGYSSFVSCRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEEPMKDTCPKCG
SKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNGKADILIGTQ
MISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKPGRVVIQTYE
EDHYSIIAAKQQNYGKFYNEEIKYREIFKYPPFSHLMNVVISGEKDEEVKNMAANAYLTC
QKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDRSILAEIAEEIQKMKYPKDI
RISIDIDPLNIM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgaggtcgttgtagacattaaatcttctaatactgacagggtatatacttat
catattcctgaaggaatgaatgtaaaaattgggatgagagtatctgttccttttaataat
aggtatatagagggttatgtaataagtattactgacaaggcgtcttactcggtggataaa
ataaaggatatctataggattttagatagctacagcatatttgatgaaaaaatgattgaa
ctggctaagtggatgagggattattataaatgttatttttctgaagctcttcagactata
atgcctgtagggataaagcaaggggaaaagaaggtaaaggttgtgaaaataaatattgat
gagatacctttccaactttctaaaagagcgccaaagcaatacgagattttacaatattta
aaaaatagaagtcctattaggctttctgagcttgtcaaagtcctgaatatagattattca
gttataaaaaatttacaaaataaagggtatataaaggtttatgaggaggaagttttgaga
tttaatataaaagatattgaaaggactaaacctttatctttgacagaggaacaaaaaaga
gctgtagaagaagttaaaaaatctatcttgacaggtacttttgataaatatttgcttttt
ggagttacgggaagtggcaaaactgaagtttatcttcaattgatagatgaagctataaaa
ataggcaaaagcgctatagttttagtaccagaaatctcattgacgcctcagacaattgaa
aggtttgtaagccgatttggcaatagggtagctgtaatacacagtggcctttcaccggga
gaacgttttgatgaatggcgaaaagtaaaaaatggtttagtggacgtagtagttggtgtg
agaaatgcagtttttgctccttttaataatcttggccttattataattgacgaggagcat
gagactacctataaacaatcagacttaagacccaaatataatgctaaagaagtggcagag
aagcggtgtgaaatacaaaaagcagttctggttatggcaagtgctactccttctttagag
acctattataaagctaataaaggagaatataaacttataaggcttacaaaaaggattaat
gtttctatgccgaagatagaagttgtcaatatgagtgaggaattggcaagtggaaatact
tcaatatttagtcgtaaattattttcctatataaaagaaaatcttaaaaggagagagcaa
actattctttttttaaacagaagaggatattcttcatttgtttcctgcagagattgtggc
tatgtgcctaaatgtcccaattgtgatatttctttaacttatcattttgaggataaaaaa
ttagtttgtcattattgcggttatgaagagcctatgaaagatacttgtcctaaatgtggg
agtaaaagaattaggtatttaggtatagggactgaaagggtagaaaacgatataaaaaaa
ttttttcctaatgcaagagttttgaggatggatgtagatactacaaggaaaaaaggttct
catgagaaaattttttatgattttagaaatggtaaggcagatattttaatcggtacgcaa
atgatatctaaaggctttgacattccaaatgttacattggtgggagtaatacttgcagat
ataactttaaatcttcctgattttaggtccagtgaaaggacttttcagctgcttactcaa
gtagctggaagggcaggaagaggtgaaaagcctgggagggttgttatacagacttatgaa
gaagaccactacagcataattgctgcaaaacagcaaaattatggaaagttttacaacgaa
gaaattaaatacagagaaatatttaaatatcctcctttttcacatctgatgaatgtagtg
atatcaggagaaaaggatgaagaggttaaaaatatggccgcaaatgcttatttaacttgt
caaaaacttattaacaaacttcaaaataagagttataataaaatactaggacctgctcct
gctcctataagtaagataaacaatagatatagatggcaggtcattttaaaaagtgaagat
agaagtattttggcggaaatagcagaagaaatccagaagatgaaatatcctaaagatata
agaatatcaatagacattgaccctttgaatataatgtaa
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